Gene Pden_4148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4148 
Symbol 
ID4582698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1305975 
End bp1306712 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID639771455 
Productcytochrome c biogenesis protein, transmembrane region 
Protein accessionYP_917908 
Protein GI119386853 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATG TCACCTATGG CGGAGCCGCG CTTGCGGGGC TGCTTTCGTT TCTGTCGCCC 
TGCATCCTGC CGATGGTGCC GTTCTATCTG TCCTACATGG CCGGGGTGTC GGTGCGCGAA
TTGCGCGACG GCGGCACGGT GGCGCCGGGC GCGCGCGGGC GGATGGTGCT GCGGGCCTGG
GCCTTTGCGC TTGGCGTGAC CACGATCTTC CTGCTGCTGG GGCTGGGCGC CACGGCGCTT
GGCAAGGCCT TCGCGCAATG GAAGGAAACC CTGTCTTGGG CGGCTGCCGG GGTGCTGATC
CTGTTCGGCC TGCATTTCCT GGGCGTGCTG CGGATCGGCC TACTTTATCG CGAGGCGCGG
GTGCAGACCG GGGCCAGGCC CTCGACCCTG GCCGGCGCCT ATGTGATGGG GCTGGCCTTC
GGCTTCGGCT GGACGCCCTG CGTGGGACCG GCGCTGGCGG CGATCCTGAT GGTGGCCTCG
GGCATGGGAG ATCTGTGGCG CGGCGGGCTG CTGCTGGTGG TCTACGGGCT TGCGATGACC
CTGCCCTTCG TGCTGGCGGC CTTTTTCGCA GGACCGTTCC TGGGCTGGGT CGCGCGCCAC
CGCGCGCTGA TGGGACATGT GGAAAAGGCG ATGGGGGTCA TGCTGATCCT GTTCGGCATC
CTGATCGCCA CCAATTCCGT GAATGTCATC GCCGACTGGA TGATTCGCCA CTTCGACTGG
ACAGCCACGC TTACCTGA
 
Protein sequence
MLDVTYGGAA LAGLLSFLSP CILPMVPFYL SYMAGVSVRE LRDGGTVAPG ARGRMVLRAW 
AFALGVTTIF LLLGLGATAL GKAFAQWKET LSWAAAGVLI LFGLHFLGVL RIGLLYREAR
VQTGARPSTL AGAYVMGLAF GFGWTPCVGP ALAAILMVAS GMGDLWRGGL LLVVYGLAMT
LPFVLAAFFA GPFLGWVARH RALMGHVEKA MGVMLILFGI LIATNSVNVI ADWMIRHFDW
TATLT