| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4132 |
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| Symbol | |
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| ID | 4582682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1288663 |
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| End bp | 1290045 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639771439 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_917892 |
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| Protein GI | 119386837 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.465086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.630404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTTT CCGTCTTCGA CATCTTCAAG ATCGGAGTCG GCCCGTCCTC GTCCCATACC
ATGGGGCCGA TGGTGGCCGC AGGCCGCTTT CTGGACGCGC TGCGCGAACA GCCCTTTCGC
GCGCACGGGC TGCGCGCCAG CCTGCACGGC AGCCTGGCCT TCACCGGCAA GGGCCACGCC
ACCGACCGCG CCACCATCCT TGGCCTGGCC GGATTCCTGC CCGAAACCAT GGATGCCGAG
GCGGCCGAGG CCGTGCTGGA GAAAAACCGC GAGACGAAGA TCCTGTCGCC GCGCGACCTG
GGCGATCTGG CCTTCGACCC GATGCGCGAC CTGATCTTCG ACTACGACCA CGCCCTGCCC
GGCCATGCCA ACGGCATGGT CCTGATGGCG ACCGACGCCC AGGGCGACGT GATCTTTCGC
GAGGTCTATT ACTCGATCGG CGGCGGCTTC GTGCTGACCG AGGGCGAGTT GGCGGCGCGC
GGCGACGACA CCCGCTCGGA TGCCTCGCCC AAGGTGCCCT TCCCCTTCGC CTCGGCGGCC
GAGATGCTGG AGATGGCCGA AAGATCGGGC AAGTCCATCG CCCAGATGAA ACGCGAGAAC
GAGCGGGTCT TTCGCAGCGA TGCCGAGATT TCAGCCGGCA TCCGCCGCAT CTGGCAGGTG
ATGCGCGACT GCATGGACCG GGGGCTTGCG ACCGGCGGCA TACTGCCCGG CGGGCTGTCG
ATCCGCCGCC GCGCCGCCGG CATCCACGAG GCGCTGAAGG CCGAGGCCGG CATGAACCTG
ACCGCGCCGC ATGTCATCAA CGACTGGATG TCGATCTATG CCATGGCCGT GAACGAGGAG
AACGCGGCCG GCGGCCAGGT CGTGACCGCG CCGACGAACG GCGCGGCGGG CGTGGTGCCG
GCGGTGATCC GCTATTGGCT GGACCATGTG CCGGGCGCGT CCGAGCGCCA GCTCGACGAG
TTCCTGCTGA CCGCCGCGGC CATCGGCGGG CTGATCAAGC ACAACGCCTC GATCTCGGGC
GCGGAATGCG GCTGCCAGGC CGAGGTCGGC TCGGCCAGCG CCATGGCGGC GGCAGGGATC
TGCGCCGCGA TGGGCGGCAC CGTCACCCAG GTCGAGAACG CCGCCGAGAT CGCGCTGGAG
CATCACCTGG GCATGACCTG CGACCCGGTA AAGGGACTGG TGCAGGTGCC CTGCATCGAA
AGGAACGGCC TTGGCGCCAT CAAGGCGGTC TCGGCCGCCA GCCTGGCGCT GCGCGGCGAC
GGCCAGCATT TCGTGCCGCT GGACGCCGCC ATCGAGACCA TGCGCCAGAC CGGCCGCGAC
ATGAGCGACA AATACAAGGA GACCTCGCTG GGCGGTCTGG CCGTCAACGT GCCCAACTGC
TGA
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| Protein sequence | MFLSVFDIFK IGVGPSSSHT MGPMVAAGRF LDALREQPFR AHGLRASLHG SLAFTGKGHA
TDRATILGLA GFLPETMDAE AAEAVLEKNR ETKILSPRDL GDLAFDPMRD LIFDYDHALP
GHANGMVLMA TDAQGDVIFR EVYYSIGGGF VLTEGELAAR GDDTRSDASP KVPFPFASAA
EMLEMAERSG KSIAQMKREN ERVFRSDAEI SAGIRRIWQV MRDCMDRGLA TGGILPGGLS
IRRRAAGIHE ALKAEAGMNL TAPHVINDWM SIYAMAVNEE NAAGGQVVTA PTNGAAGVVP
AVIRYWLDHV PGASERQLDE FLLTAAAIGG LIKHNASISG AECGCQAEVG SASAMAAAGI
CAAMGGTVTQ VENAAEIALE HHLGMTCDPV KGLVQVPCIE RNGLGAIKAV SAASLALRGD
GQHFVPLDAA IETMRQTGRD MSDKYKETSL GGLAVNVPNC
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