| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4129 |
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| Symbol | |
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| ID | 4582679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1284765 |
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| End bp | 1286222 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639771436 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_917889 |
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| Protein GI | 119386834 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.413463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCA CCGTTCTGAT CGCTGACGAC GACCGCACCA TCCGTACGGT CCTGACCCAG
GCCCTGACCC GGGCCGGCTG TCGGGTCCAT GCCACCGGCT CGCTGTCGCA GTTGCTGCGC
TGGGTCGAGG AGGGGCGCGG CGATCTGGTC GTCACCGACG TGATGATGCC CGACGGCAAC
GGCATCGACA TGATCCCGGC GATCCGCAAG GCGCGGCCCG ACCTGCCGGT GATCGTGATC
TCGGCCCAGA ACACCATCGT CACCGCCATT CGCGCCACCG AGGCGGCGGC CTTCGACTAC
CTGCCCAAGC CCTTCGACCT GCCCGACCTG ATGGCGCGGG CCGGCCAGGC GCTGTCGCGC
CGGGTGCGCA GGTCCGACCC GGCGCCCGCC GCGGCGGCAC CCGCGCCCGA GGCCGGCGCC
GACCCGGCCC TGCCGCTGAT CGGTCATGCG CCCTCGATGC AGAACCTGTT TCGCATGGTG
GCGCGCGTGC TCAATGCCGA CCTGCCGGTG ATCGTCGCCG GCGAGGCGGG GGTGGGCAAG
ACCGTGGTCG CCCGCTCGTT CCACGACCTC TCCGACCGGC GCGAGGCAGG GCTGGTGGTG
CTGACCGCGG CCGACCTGTC CGAAGAGGCC ATCCACAACG CCGCCGAGCG GGCGCAGGGC
GGCACGCTGC TGATCGAGGA CCCGGCCGGC TTCGACGCCG CCGCCCAGGC AAGGCTGATC
GGCATGATCG AGGCATGGGA GGTCGGCCCC GGCCGCAACC TGATGCCGCG CCTTGTTTCG
ACCACCGGCC CCGACCCGCA GGCGGACGTG GCCGCGGGCC GGCTGCGGGC GGACCTGTAT
TACCGCCTGG CCGGGGTGAC GATCACCGTG CCGCCGCTGC GGGCGCGGGT GGACGACATC
CCGCCGCTGG CGCGGCACCT GCTGGCCCGT GCCGCCGCGC AGGGCCTGCC GCAGCGCAAG
CTTTCCGAGG GCGCGACGGC GCTGATCCGC GCCTATCCCT TTCCCGGCAA CGTGCGCGAG
CTGGAAAACC TGATGCGGCG GCTGGCGCTG ACCGCCGCGG CGGCCGAGAT CAGCGAGGCC
GAGGCCCGCA CCGCGCTGGC GCAATCCAGC CCCATCATGC CGCAGGCCCC GGCCGCCGTG
CCGACCTCGG CCGCCGGCAC GATCAGCCCG GCCGCCCCGG TCACGCCGCT GGGCGAGCCC
GCCAACATGC GGCTGGCGCA ATCGGTCGAG ATGCATCTGC AACGCTATTT CGACCTGCAT
GGCGACGACC TGCCGCCCCC GGGCCTTTAC GACCGCATCC TGCGCGAGAT CGAAAAGCCG
CTGCTGGAGA TCGCGCTGGA CGCCACCGGC GGAAATCAGC TGCGTTGTGC CGATCTTCTG
GGCATAAACC GCAATACGCT GCGCAAGAAA CTGACCGACC TGAATATCGA GGTGACACGG
CGCCGCAAAC TGATGTAA
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| Protein sequence | MDGTVLIADD DRTIRTVLTQ ALTRAGCRVH ATGSLSQLLR WVEEGRGDLV VTDVMMPDGN
GIDMIPAIRK ARPDLPVIVI SAQNTIVTAI RATEAAAFDY LPKPFDLPDL MARAGQALSR
RVRRSDPAPA AAAPAPEAGA DPALPLIGHA PSMQNLFRMV ARVLNADLPV IVAGEAGVGK
TVVARSFHDL SDRREAGLVV LTAADLSEEA IHNAAERAQG GTLLIEDPAG FDAAAQARLI
GMIEAWEVGP GRNLMPRLVS TTGPDPQADV AAGRLRADLY YRLAGVTITV PPLRARVDDI
PPLARHLLAR AAAQGLPQRK LSEGATALIR AYPFPGNVRE LENLMRRLAL TAAAAEISEA
EARTALAQSS PIMPQAPAAV PTSAAGTISP AAPVTPLGEP ANMRLAQSVE MHLQRYFDLH
GDDLPPPGLY DRILREIEKP LLEIALDATG GNQLRCADLL GINRNTLRKK LTDLNIEVTR
RRKLM
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