| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4124 |
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| Symbol | hfq |
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| ID | 4582674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1277381 |
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| End bp | 1277614 |
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| Gene Length | 234 bp |
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| Protein Length | 77 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639771431 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_917884 |
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| Protein GI | 119386829 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.304133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.524604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGGCG ACAAACAGAA CCTCCAGGAC GCTTTTCTGA ACCATGTGCG CAAGGGCAAG
GTTCCGGTTA CGATTTTTCT TATCAATGGT GTGAAATTGC AGGGCGTCAT CACCTGGTTC
GACAATTTCT GCGTGCTCCT GCGCCGCGAC GGTCAGTCGC AGCTGGTCTA CAAGCACGCC
ATCTCGACCA TCATGCCGGG GCAGCCGATC AGCCTCTATG AGGGCGAGGA CTGA
|
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| Protein sequence | MAGDKQNLQD AFLNHVRKGK VPVTIFLING VKLQGVITWF DNFCVLLRRD GQSQLVYKHA
ISTIMPGQPI SLYEGED
|
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