Gene Pden_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4123 
Symbol 
ID4582673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1276073 
End bp1277380 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content69% 
IMG OID639771430 
Productsmall GTP-binding protein 
Protein accessionYP_917883 
Protein GI119386828 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.214153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.607101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGAAC CGACGGAAAC CCGCGAACGC CCGACCCGGG CCTATGTGAT CCATCCCGAT 
CTGGGCAATT CGCGCACCCG CCGTTCGCCG GATCTGGCCC TGGAAGAGGC CGTGGCGCTG
GCCCACGCGC TGCCCGCCAT CGAGGTGACG GGGGCCGAAG TGGCACGGCT GCGCAATCCC
GATCCGGGCA TGCTGTTCTC CAAGGGCAAG CGCGAAGAGA TCGGCCAGCA CCTGGAGGCC
GCCGCCGCGG GCGAGGGGGC CGAGCTGGTG CTGATCGACG GGCCGGTCAC CCCGGTCCAG
CAGCGCAATC TGGAAAAGGA ATGGGGCGTC AAGATCCTCG ACCGCACCGG GCTGATCCTC
GAGATCTTTG CCGACCGGGC GCAGACGCGC GAGGGCGTCT TGCAGGTGGA ACTGGCGGCG
CTGGCCTATC AGCGCACGCG GCTGGTGCGG GCCTGGACCC ACCTGGAACG CCAGCGTGGC
GGGCTTGGCT TCGTCGGCGG CCCCGGCGAG ACCCAGATCG AGGCTGACCG CCGCGCCATC
GATGAGCAGG TGGTGCGCCT GCGCCGCCAA CTCGAGCGCG TGGTCAAGAC GCGCGAGCTG
CACCGCAAGG CCCGTGCCAA GGTGCCCTAT CCGATCGTCG CGCTGGTCGG CTATACCAAC
GCCGGAAAGT CCACGCTTTT CAACCGTCTG ACCGGGGCCG AGGTCCTGGC GCAGGACCAG
CTTTTCGCCA CGCTGGACCC GACCATGCGG CAATTGACGC TGCCCGGTGG GCGCCGGGTG
ATCCTGTCCG ATACGGTGGG TTTCATCTCG GACCTGCCGC ATGAACTGGT CGCCGCCTTC
CGCGCCACGC TGGAAGAGGT GCTGGCGGCC GACCTGATCC TGCATGTGCG CGACATCAGC
CATCCCGAGA CCGAGGAGCA GGCGGGGGAT GTCGGCGAGA TCCTCGATTC GCTGGGCGTC
GAAGAGGACG TGCCGCTGAT CGAGGTCTGG AACAAGATCG ACGCGCTTTC GCCGGAGACC
CGCGCCGCAC TTCAGCGCAC CGACGCACGG ACCCAAGGCG TGCAGGCGAT CTCGGCGCTG
TCGGGCGAGG GGCTGGATAC GCTGCTGGCC GCCATCGAGG CGCGCTTGGC AGAGGTGCTG
GATGAGCCGC GCCGCGAGGC CGAACTGGTG CTGCCGCATT CGGACGGGCG GCGCCGGGCC
TGGCTGCACG AGCAAGGCGT GATCACCGCC GAAGAGGTGG CCGAGGATGG CGTGCGCCTG
CGCCTGCGCT GGACGGATCG GCAGAAGGCG GCCTTCCAAG CGCTTTGA
 
Protein sequence
MAEPTETRER PTRAYVIHPD LGNSRTRRSP DLALEEAVAL AHALPAIEVT GAEVARLRNP 
DPGMLFSKGK REEIGQHLEA AAAGEGAELV LIDGPVTPVQ QRNLEKEWGV KILDRTGLIL
EIFADRAQTR EGVLQVELAA LAYQRTRLVR AWTHLERQRG GLGFVGGPGE TQIEADRRAI
DEQVVRLRRQ LERVVKTREL HRKARAKVPY PIVALVGYTN AGKSTLFNRL TGAEVLAQDQ
LFATLDPTMR QLTLPGGRRV ILSDTVGFIS DLPHELVAAF RATLEEVLAA DLILHVRDIS
HPETEEQAGD VGEILDSLGV EEDVPLIEVW NKIDALSPET RAALQRTDAR TQGVQAISAL
SGEGLDTLLA AIEARLAEVL DEPRREAELV LPHSDGRRRA WLHEQGVITA EEVAEDGVRL
RLRWTDRQKA AFQAL