| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4121 |
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| Symbol | |
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| ID | 4582671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1273918 |
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| End bp | 1274550 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639771428 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_917881 |
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| Protein GI | 119386826 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.188449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTGC GCATCCTCGA CCGCTTCGAA GAAATCCTGA TCTCGGTGCT GATGGCCCTT
GCCGTCGCAT TGATCTTCGT TGCGGTCGTT CATCGCTTTT CGCTGGGCAC CGCCGCCGAC
CTGGTCGGTT GGGCCCGTGC CCACGATATG CCCGGGCTGC AGGATACGGC CCGGTCGATC
TTCAGATGGA TCAACTCGCT CAAGCTGACC TGGGCGCAAG AGACCTGCAT CTACCTGTTC
GTGTGGATGG CGAAGTTCGG CGCGGCCTAT GGGGTGCGCA TCGGCATCCA TGTCGGCGTC
GATCTTCTGG TGCAAAGCCT GACGGGAACC GCGCAGAAGG CCATGACCGT CGTCGCGATG
TCGGGCGGGA TCATCTTTAC CGCGATCATC GCCTGGATCG GGACGGATTT CGTCTATCAC
ACCTGGAAGG GCGGCCAGAT CTCGCCGGAT CTCGAGATCA AGATGTGGAT CGTCTATCTG
GCCGTTCCGG TCGGTTCGGC GCTGATGTGC TTTCGCTTCG TTCAGGCGCT GTGGCTGTAT
CTGACCACCG GCCATGTCGC CCATCACGAT ATGGGCTCGG TCGAAGGCGT GCAGGAAGAG
GCCGACGATA TCGCCAAGGG AGGTCACGGA TGA
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| Protein sequence | MILRILDRFE EILISVLMAL AVALIFVAVV HRFSLGTAAD LVGWARAHDM PGLQDTARSI
FRWINSLKLT WAQETCIYLF VWMAKFGAAY GVRIGIHVGV DLLVQSLTGT AQKAMTVVAM
SGGIIFTAII AWIGTDFVYH TWKGGQISPD LEIKMWIVYL AVPVGSALMC FRFVQALWLY
LTTGHVAHHD MGSVEGVQEE ADDIAKGGHG
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