| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4119 |
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| Symbol | |
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| ID | 4582669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1271048 |
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| End bp | 1272553 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639771426 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_917879 |
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| Protein GI | 119386824 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.240662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGA TCACCGAAGG CCATGTCATC GACAGCGTGG CCGACGCCCT GCAGTTCATA
TCGTATTACC ATCCGCGCGA TTTCATCCGG GCGATGTCGG CGGCATGGGC GGCCGAGCGA
AGCCCGGCGG CCAGGAACGC CATGGCGCAG ATCCTGGTCA ATTCCCGCAT GGCCGCGATG
GGGCACCGGC CGATCTGCCA GGATACGGGC GTCGCCAACA TCACCGCCCG GATCGGCGTG
CGGGCGCAAC TGGACTGGGA CCGGCCGCTG CAAGAGATCG TGGACGACGC CGTGCGCCGG
GCGTATCGCA ACGATGCCAA TCCGCTTCGC GCCTCGGTCG TGGCCGATCC GTTCGGGCGG
CGGCGCAACA CCAGCGACAA TGCCCCGGCC ATGCTGCATG TCGAGATGGT CGCTGGCACC
TCGGTCGAGT TCGACGTCTC GGCCAAGGGC GGCGGTTCCG AGAACAAGAC GAAATTCGCG
GTCCTGAACC CCTCGGCCGA TGTCGCCGAC TGGGTGGTCG GGACGGTCGA GGCGATGGGC
GCGGGCTGGT GTCCTCCGGG CATCCTGGGC CTTGGCATCG GCGGCAGCGT GGACAAGGCC
ATGGTCATGG CGAAACAGGC CCTGAACCAG CCGATCGATG CGACCGAGCT GCGCACGCGT
GGCCCCGCGA CCCCCGAAGA GGAGCTGCGG CTGGAGATCA TGGACCGGGT CAATGCGCTT
GGCATCGGCG CGCAGGGCCT GGGCGGCATC ACGACGGTCC TGGACGTGAA GGTTTGCAGC
TTTCCCACCC ATGCCGCCTC GCTGCCGGTG GCGCTGGTGC CGAACTGCGC GGCGACGCGC
CATGTGCATT TCACGCTGGA CGGATCCGGG CCGGCGCGGC TGGTTCCGCC CGATTTGTCC
GACTGGCCCG AACTCGACTT TCGCGACGCC TGGAAGGATG CCCGCCGCGT CGACCTGGAC
CGCCTGACCC GCGAGCAGAT CGCAAGCTGG CGGCCGGGCG AGACCCTGCT GCTGTCCGGG
CGCCTGCTGA CCGGGCGCGA CGCCGCCCAT CGCCGGATCG AGCAGATGCT GGCCGAGGGC
AAGCCCCTGC CGGTCAGCTT TCGCAACCGT GCGATCTATT ATGTCGGCCC GGTCGATCCC
GTCGGCGGTG AGGTGGTCGG GCCGGCCGGT CCCACCACCT CGACCCGGAT GGACCGCTAC
AGCGACATGA TGCTGGAAAC GCTGGGCGTG TCGGTGATGA TCGGCAAGGC CGAGCGCGGC
CAGGAGACGA TCGAGGCCAT CGCCCGGAAC GGCGCCGCCT ATCTGGTCGC GGTGGGCGGC
GCGGCCTATC TGGTCTCGCA GGCGATCCGC GAGGCGCGCG TGCTGGGGTT CGAGGATCTT
GGCATGGAGG CGATCCACGA ATTCACCGTC AGGGACATGC CGGTCACGGT GGCGGTGGAC
GCGCGCGGCA CCTCGGTCCA TGCCAGCGGC CCGCGGCAAT GGCGGATGCC GCCGCCCCGG
GCGTGA
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| Protein sequence | MPAITEGHVI DSVADALQFI SYYHPRDFIR AMSAAWAAER SPAARNAMAQ ILVNSRMAAM
GHRPICQDTG VANITARIGV RAQLDWDRPL QEIVDDAVRR AYRNDANPLR ASVVADPFGR
RRNTSDNAPA MLHVEMVAGT SVEFDVSAKG GGSENKTKFA VLNPSADVAD WVVGTVEAMG
AGWCPPGILG LGIGGSVDKA MVMAKQALNQ PIDATELRTR GPATPEEELR LEIMDRVNAL
GIGAQGLGGI TTVLDVKVCS FPTHAASLPV ALVPNCAATR HVHFTLDGSG PARLVPPDLS
DWPELDFRDA WKDARRVDLD RLTREQIASW RPGETLLLSG RLLTGRDAAH RRIEQMLAEG
KPLPVSFRNR AIYYVGPVDP VGGEVVGPAG PTTSTRMDRY SDMMLETLGV SVMIGKAERG
QETIEAIARN GAAYLVAVGG AAYLVSQAIR EARVLGFEDL GMEAIHEFTV RDMPVTVAVD
ARGTSVHASG PRQWRMPPPR A
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