Gene Pden_4022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4022 
Symbol 
ID4582573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1170462 
End bp1171013 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID639771331 
Productredoxin domain-containing protein 
Protein accessionYP_917784 
Protein GI119386729 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.590081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.972856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTC GTCCTCCGGT TTGCGATTTC GGCGCCAAGG CGCCGGACTT CACATTGCCA 
GATCCCGATG GGCGCATGTT CTCGTTCAGC GACATCGCCG GGCCGAGCGG CACGCTGGTC
ATGTTCATCT GCAACCATTG CCCCTATGTG CAGGCCGTCA TCGACCGCAT CCGGCGCGAC
GCCGCCGAAT TGCAGGGGCT GGGCGTGGGC GTCGTGGCGA TCTCGGCCAA CGACGTCGCC
GAATATCCGC AGGACGCGCC CGAACAGATG AAGCTCGAGG CCGAAAGGCA CGGCTTCACC
TTTCCCTATC TCTACGACGA AAGCCAGGAT GCCGCGCGCG CCTATGGCGC CGAATGCACG
CCGGATTTCT TCGGCTACAA TGCCGCGGGC GAATTGCAGT ATCGCGGCCG GCTGGACGCC
TCGGGCCGCA ATCCGGCGCC GCCGGACGCC CGGCGCGAAC TGTTCGAGGC CATGGCGCAG
ATCGCCCAGA CCGGGCAGGG TCCGCGCGAA CAGGTGGCCT CGATGGGCTG CTCGATCAAA
TGGAAGGCGT GA
 
Protein sequence
MAVRPPVCDF GAKAPDFTLP DPDGRMFSFS DIAGPSGTLV MFICNHCPYV QAVIDRIRRD 
AAELQGLGVG VVAISANDVA EYPQDAPEQM KLEAERHGFT FPYLYDESQD AARAYGAECT
PDFFGYNAAG ELQYRGRLDA SGRNPAPPDA RRELFEAMAQ IAQTGQGPRE QVASMGCSIK
WKA