| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4004 |
|---|
| Symbol | |
|---|
| ID | 4582555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1145983 |
|---|
| End bp | 1146531 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639771313 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_917766 |
|---|
| Protein GI | 119386711 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5483] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.232162 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTGC CGTTTTTTAC CATCGGCCAT TCCAACCGGA GCATCGCGAC CTTCGCCGGG
CTTCTGCATG AGGCGCAGGT GGAACTCGTC GTCGATATCC GGAAAATCCC GATGTCGAGG
GCCAACCCGC AGTTCAACAA GGATGTGCTG CCCACCGTCT TGTCCAATCT TCGGATCGGC
TACGAGCATA TCGCCGCGCT TGGCGGCCTT CGGGGCAAGG CCGCGGCATC GGCCCCCGAG
GTTAACGGGC TGTGGAAGAA TCGGAGCTTT CGCAACTACG CGGATTATGC GCTTACGGAA
CGGTTCCGCG AGGGCCTTGG CCGCCTGATC GAGATGGGGC GCGAGCGGCG CTCGGCGATC
ATGTGCTCGG AGGCGGTCTG GTGGCGATGC CACCGCCGCA TCGTCGCGGA TTACCTCATT
GCAAATGGGC ATGCGGTTTT TCACATCATG GGTCCGGGTC GCGTCGAACC CGCCCGCCTG
ACCGCCGGTG CCGTCATCCG GCCCGACAGA ACCGTCGTCT ATCCCGGCCT GTCCGGGGCC
GAGCCATGA
|
|---|
| Protein sequence | MELPFFTIGH SNRSIATFAG LLHEAQVELV VDIRKIPMSR ANPQFNKDVL PTVLSNLRIG
YEHIAALGGL RGKAAASAPE VNGLWKNRSF RNYADYALTE RFREGLGRLI EMGRERRSAI
MCSEAVWWRC HRRIVADYLI ANGHAVFHIM GPGRVEPARL TAGAVIRPDR TVVYPGLSGA
EP
|
|---|
| |