| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3998 |
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| Symbol | |
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| ID | 4582549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1136639 |
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| End bp | 1137964 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639771307 |
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| Product | putative membrane-associated zinc metalloprotease |
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| Protein accession | YP_917760 |
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| Protein GI | 119386705 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.434108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGG TTCTGGACAT GATGGGCGGG TTCGTGTGGA CCGTGGCGGC CTTCATCGTC
GCGCTGTCGG TCATCGTCAC CGTGCATGAA TACGGCCATT ACATCATCGG CCGGCTGTGC
GGCATCAAGG CCGAGGTGTT TTCGCTGGGC TTCGGGCCGC GGCTGGCGGC GCGGCGCGAC
CGGCACGGCA CGGTCTGGCA GGTGGCGGCG ATCCCGCTGG GCGGCTATGT GCGCTTTCTG
GGCGATGCCG ATGCGGCCAG CGCGGGATCG GTGCCGGTCG ATCCGGCCCG CGCGCGCCAA
AGCCTGACCG GCGCGCCGCT CTGGGCGCGC TTCGCCACCG TTGCGGCGGG GCCGGTGTTC
AACTTCATCC TGTCGATCCT GGTCTTTGCC GGCATGGCGA TCTGGCAGGG CCTGCCGGTG
GACGAGGTCC GGGTGGGGCA GCTGCACCCG ACGCCTCCCG GCGTCGAGAT GCAGCTGCAA
CCGGGCGACC GCGTTTTGGC GCTGGACGGC CGGCCCGTCG CTAACTGGCG CGACCTTGGC
GCGGCGGCGG GCGAATTGCC CTCGCGTCCC AGCCACGACT GGACCGTGCT GCGCGACGGC
ACCGAAATCA CCGTGCCGGG CCCCGACCCG ATGCCGCCGC TGGTCACCGG CATCGCGCCG
CGCAGCCCGG CGGCCACGGC GGGGCTGAAG CCGGGCGACG TGATCCTGGC CATCGACGGC
GAGCCGGTCT CGCGCTTCGA CGAATTGCGC CGGCATGTGG CCGAGGCCGA GGGCCGGCCG
GTGCTGCTGA AGGTCTGGCG CGAGGGCGAG GGCGAGGCCG ACTACACCCT GGCTGCCCGC
GAACAGGACC TGCCCACCGG CGACGGCTAT GCAAGGCGCT GGCTGATCGG CGTGACCGGC
GGCGGCACCT ATTTCGAGCC TGCGACCCGC CCGGCTGCCA TGGGCGAGGC GCTGGGGATC
GGCGCCGCGC GCACCTGGGA CATCATCGCC TCGTCCGTCT CGGGGCTCTG GGCGATGATC
ACCGGCCAGA TCGGCAGCTG CAACCTGGGC GGCGCGATCT CGATCGCCGA GACCACGGGG
CAGGCGGCCT CGGCGGGGGG CGGAAACTTC ATCTGGTGGA TCGCCGTGCT GTCCGCGGCC
ATCGGTTTTC TGAACCTGCT GCCGGTGCCG GTGCTCGATG GCGGGCATCT GATGTTCTAT
CTCTACGAAG CGGTGGCGGG CCGGCGGCCG TCGGACCGGG TGATGGACAT CCTGTCGGCG
CTGGGGCTGG CGGCGGTGCT GTCGCTGATG GTTCTGGGCC TCACCAACGA TCTTTTCTGC
CCCTGA
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| Protein sequence | MSLVLDMMGG FVWTVAAFIV ALSVIVTVHE YGHYIIGRLC GIKAEVFSLG FGPRLAARRD
RHGTVWQVAA IPLGGYVRFL GDADAASAGS VPVDPARARQ SLTGAPLWAR FATVAAGPVF
NFILSILVFA GMAIWQGLPV DEVRVGQLHP TPPGVEMQLQ PGDRVLALDG RPVANWRDLG
AAAGELPSRP SHDWTVLRDG TEITVPGPDP MPPLVTGIAP RSPAATAGLK PGDVILAIDG
EPVSRFDELR RHVAEAEGRP VLLKVWREGE GEADYTLAAR EQDLPTGDGY ARRWLIGVTG
GGTYFEPATR PAAMGEALGI GAARTWDIIA SSVSGLWAMI TGQIGSCNLG GAISIAETTG
QAASAGGGNF IWWIAVLSAA IGFLNLLPVP VLDGGHLMFY LYEAVAGRRP SDRVMDILSA
LGLAAVLSLM VLGLTNDLFC P
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