| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3956 |
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| Symbol | |
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| ID | 4582507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1091719 |
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| End bp | 1094529 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771265 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_917718 |
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| Protein GI | 119386663 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.619091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCCA AGGATACCGA CAGCCTGCCG CAAAGCGCCC CGGCCCTGCC CGGGGCGCAT
TCGCTGTTCA GCCCCGAAAG CTTCCTGCCG GCGCTGACCG AGGCGCTGCG CGACATCGCC
GAGCCGCGCG AGATCCGGGC GCGCACCGTC GCGATCCTGA CCCAGGCCCG CAATGCCGCC
ATGGGCGACA TCGCCGCGGG CTTCATGTCC CACCCCCGCG CCGCGCGCGA GACGGTGCGC
GCCATCGCCA GCCTTACCGA CGCCACGGTG ACGGCAATCC ACCACGTCGC GACCACCATC
CTGCACCCGC TGCTCAACCC TACGGATGCC GAGCGGCTGG CGGTGCTGGC CATCGGCGGC
TATGGCCGGG CCGAGATGGC GCCGCAATCC GACGTGGACC TGCTGTTCCT GACGCCGTGG
AAGGTCAGCG GCTGGGCCGA GAGCGTCGTG GAATCGATGC TCTACATGCT GTGGGACCTG
AAGCTGAAGG TCGGCCAGTC CACGCGCTCG ATCGACGACT GCCTGCGGCT GGGCGCGGGC
GACATCACCA TCCGCACCAG CCTGCTGGAG CACCGGCTGA TCTGCGGCCA TGCCACCGCC
GCCGAAGTCC TGCGCGACCG GCTGTGGTCC GAGCTTTTCG ACAAGACCGT CCCCGAATTC
ATCGAGGCGA AGCTGGCCGA GCGGGCCGAG CGCCACCGCC GCCAGGGCGG TCAGCGCTAT
GTGCTGGAGC CTAACGTCAA GGAGGGCAAG GGGGGCCTGC GCGACCTGCA GACCCTCTAC
TGGATCGCAA AATACATCCA TCGCGTCGAC CGCGCCGTGG AACTGGTCGA CCTGGGCTTC
TTCACCCGCG AAGAGCACCT GACCTTCTGG CAGGCCGAGG ACTTTCTCTG GGCGGTGCGC
TGCCACCTGC ACCTGATCGC GGGACGGCCG GCCGACAAGC TGACCTTCGA CATGCAGGTC
GAGGTCGCCA GGCGCATGGG CTATCGCGAC CTGGGCGGGC GCCGCGCGGT CGAGATATTC
ATGCAGGATT ATTTCCTGCA CGCCACCAGG GTGGGCGAGC TGACGCGGGT GTTCCTGGTC
GCGCTGGAGG CAAGGCACCT CTACCGTGCA CCGATCATGA ACCTGCTGTT CCAGCGCCGC
CGCCGGGTCC GCTCGGGCTT CCGGATGGAC CGGGGCCGGC TGACCTATGG CGACGAGCGG
CAATTCCTGT CCGACCCGCT GAACATCCTG CGGCTTTTCG AAGAGGCGCT TCGGACCGGC
ATCCTGATCC ATCCCGACGC CATGCGCGTC GTCACCGCCA ATCTGGAGAT GATCGACGAC
CGCATGCGTT CGGACCCCGA GGCGGTGCGC ATCTTCCTCG ACCTGCTCCT GAAGCACGGC
AACCCGGAAC GTTCGCTGCG CCGGATGAAC GAATTGGGGG TGCTGGCCGC CTTCATCCCC
GAATTCGCGC CGGTCGTGGC GATGATGCAG TTCAACGTCT ATCACCATTA CACTGTGGAC
GAGCACCTGA TCCAATGCGT GGCAGCCCTG GCCGCCATCG AGCGCGGCGA GGATGCCGAG
GATCTGCCCG TGGTCAGCAA GATCATGAAG GGCAAGGTGA ACCGGCGGGT CATCTATCTT
GCCGTGCTGC TCCACGACAT CGGCAAGGGC CGGGCCGAGG ACCATTCGAT CCTGGGCGCG
CGGCTGGCGC GGCGCATCTG CACCCGCTTC GGCCTGCCTG CGGATGAGAT CGAGACCATC
GAATGGCTGA TCCGCAACCA CCTGCTGATG TCGGATGTGG CGCAGAAACG CGACATTGCC
GATGCGCGCA CGCTTCGCGA CTTCGCCAAG GCGGTCAAGA CGACCAAGCG GCTGGACATG
CTTCTGGTGC TGACCGTCTG CGACATCCGC GGCGTCGGCC CCGGCACCTG GAACAACTGG
AAGGCGATGC TGCTGCGCAA GCTGCACCAG GAAACCAAGC TTGCGCTGGA GAACGGGCTG
GAGGAGCTGA ACCGCGACAA GCGCATCGGC GAGGCCAAGC GTTCGCTGCG CCACCTGCTG
ACGGCCAAGG GCTGGGAGCC CAGGGCCATC AAGGCCGAAC TGGGCCGGCA TTACGACAAT
TACTGGCCGG GCCTGCCGAC CGAGACGCAA TATGTCTTTG CCCAGATGCT GAAGGACCTG
GGCGATCACG AGATCCGCAC CGACCTGCAT CCCGATACCG ACCGCGATGC GACGCGGGCC
GCCTTCGTGC TGGCCGACCA TCCCGGCATC TTCTCGCGCA TGGCCGGCGC CCTGGCGCTG
GTGGGCGCGA ATATCGTCGA CGCGCGCACC TATACCACCA AGGACGGCTT CGCCACCGCC
GTGTTCTGGT TGCAGGATGC GGACGGCCAT CCCTATGCCG CCGACCGCCT GCCCCGCCTG
CGCACCATGA TCCAGCGCAC CCTGAAGGGC GAGATCGTCG CGCGCGAGGC GCTGGCCGGC
CGCGACAAGC CGAAGAAGCG CGAGGCGGCC TTCCGCTTCC CCACCCATGT CACCTTCGAC
AACGAGGCAT CCGACGTCTA CACGGTGATC GAGGTCGATA CCCGCGACCG TCCGGGCCTG
CTCTACGACC TGACCCGGAC CCTGGCCGAC AACCACATCC AGATCGCCAG CGCCGTGATC
GCCACCTTTG GTGCGCAGGT GGTGGACACC TTCTATGTCA AGGACATGTT CGGGCTGAAG
CTGCACCAGC CACAACGCCG TGAGGCGCTG GAAAAAAGGC TGCGGCAGGC GATCAAGGAA
GGGGTCGAGC GGGCCGAGCG GGCCGAGCGC CCGTCGGGCG GGACGTTCTG A
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| Protein sequence | MSAKDTDSLP QSAPALPGAH SLFSPESFLP ALTEALRDIA EPREIRARTV AILTQARNAA
MGDIAAGFMS HPRAARETVR AIASLTDATV TAIHHVATTI LHPLLNPTDA ERLAVLAIGG
YGRAEMAPQS DVDLLFLTPW KVSGWAESVV ESMLYMLWDL KLKVGQSTRS IDDCLRLGAG
DITIRTSLLE HRLICGHATA AEVLRDRLWS ELFDKTVPEF IEAKLAERAE RHRRQGGQRY
VLEPNVKEGK GGLRDLQTLY WIAKYIHRVD RAVELVDLGF FTREEHLTFW QAEDFLWAVR
CHLHLIAGRP ADKLTFDMQV EVARRMGYRD LGGRRAVEIF MQDYFLHATR VGELTRVFLV
ALEARHLYRA PIMNLLFQRR RRVRSGFRMD RGRLTYGDER QFLSDPLNIL RLFEEALRTG
ILIHPDAMRV VTANLEMIDD RMRSDPEAVR IFLDLLLKHG NPERSLRRMN ELGVLAAFIP
EFAPVVAMMQ FNVYHHYTVD EHLIQCVAAL AAIERGEDAE DLPVVSKIMK GKVNRRVIYL
AVLLHDIGKG RAEDHSILGA RLARRICTRF GLPADEIETI EWLIRNHLLM SDVAQKRDIA
DARTLRDFAK AVKTTKRLDM LLVLTVCDIR GVGPGTWNNW KAMLLRKLHQ ETKLALENGL
EELNRDKRIG EAKRSLRHLL TAKGWEPRAI KAELGRHYDN YWPGLPTETQ YVFAQMLKDL
GDHEIRTDLH PDTDRDATRA AFVLADHPGI FSRMAGALAL VGANIVDART YTTKDGFATA
VFWLQDADGH PYAADRLPRL RTMIQRTLKG EIVAREALAG RDKPKKREAA FRFPTHVTFD
NEASDVYTVI EVDTRDRPGL LYDLTRTLAD NHIQIASAVI ATFGAQVVDT FYVKDMFGLK
LHQPQRREAL EKRLRQAIKE GVERAERAER PSGGTF
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