Gene Pden_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3948 
Symbol 
ID4582499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1084256 
End bp1084576 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content66% 
IMG OID639771257 
Productsmall multidrug resistance protein 
Protein accessionYP_917710 
Protein GI119386655 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGGA TCTATCTGGG TGTGGCGGGG TTGTACGAGG TGATCTGGGC CTTTGCCATG 
AAGCAGTCCG ACGGCTTCAC CCGGCCCTGG GCGACCGCGA CCACCCTTGT CGCCATGGCG
GCCAGCGTCT GGTTCCTGTC GCTGTCGATG AAGGTGCTGC CCCTGGGCAC CGCCTATGTC
ATCTGGACGG GCATCGGCGC GGTCGGCACC TTCGTTCTGG GGGTGCTGCT GCTGGGCGAA
TCGGCCGATT CGCTGCGCCT TCTCGCGGCG GTGCTGATCG TTGCGGGCCT GGTGCTGATG
AAGATCGCCT CGCCGCATTG A
 
Protein sequence
MAWIYLGVAG LYEVIWAFAM KQSDGFTRPW ATATTLVAMA ASVWFLSLSM KVLPLGTAYV 
IWTGIGAVGT FVLGVLLLGE SADSLRLLAA VLIVAGLVLM KIASPH