Gene Pden_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3947 
Symbol 
ID4582498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1083740 
End bp1084216 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID639771256 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_917709 
Protein GI119386654 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCAAG GTCAAGCCGG GCTGGCCCCA CCGAAGGATT GCTGGCAAGA TGGCGGCATG 
ACGATACCGC CCAAGCTGAT CGGCACGCTG GAATCCGCGC TTTACGCCGA GGATCTGGAC
GAGGCTGCCC GTTTCTGGAC CGGAATCATC GGCCTGCCCG AGATCGCCCG GGTGCCCGGC
CGGCATGTGT TCTTTCGCTG CGGCGCGCAG GTGCTGCTGG TGTTTCGTGC CGACGCGACC
CGCATCCCGC CCAAGCCCGA TGCCCGCCTG CCTGTGCCGC CGCATGGCAG CGAGGGGCCG
GGGCATTTCT GCATGGGCGC CAAGCCGGAC ACGTTCGACG CCTGGCGCGC GCATCTGGAG
GCGTCGGGCA TCGAGATCGA GGCCGATTTC ATCTGGCCGC AAGGCGGCAG GTCGCTGTAT
TTCCGCGATC CTGCCGGGAA CTCCATCGAG ATTGCCGATC CCGCGATCTG GGCGTGA
 
Protein sequence
MGQGQAGLAP PKDCWQDGGM TIPPKLIGTL ESALYAEDLD EAARFWTGII GLPEIARVPG 
RHVFFRCGAQ VLLVFRADAT RIPPKPDARL PVPPHGSEGP GHFCMGAKPD TFDAWRAHLE
ASGIEIEADF IWPQGGRSLY FRDPAGNSIE IADPAIWA