| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3933 |
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| Symbol | |
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| ID | 4582484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1069721 |
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| End bp | 1070734 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639771242 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_917695 |
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| Protein GI | 119386640 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACC TCGATCCAGC AACGCCCCCC GTCCCGGGGC AGATCACGGC GCCTTCCGGG
GCCCAGGCGC TGCGCTATGT CTTCCTGTTG CTGGACCGTT TCACCATGGT TTCCTTTGCC
GCCGCCATCG AGCCTTTGCG GCTGGCGAAC CGGCTGGCCG GGCGCGAACT TTACCAGTGG
CGGCTGATCG GCGAACAGGG CGAGACCGCG CTTTGCTCGA ACGGTGCGCG CATCCTGCTG
GACGGCCCGC TGTTTGAAAC CCGGCGCGAC GACACGGTGC TGGTCTGCGG CGGGCTCGAC
GTGGCGCGGG CCGCGACGAG GCCGGTTCTG GCCTGGCTGC GGCGCGAGGC GCGGCGCGGC
ACCCGGATCG GCGCGCTGTG CACCGGCGCC TGGGTGCTGG CCGAGGCCGG GCTGCTCGAC
GGGCGCCGCG CCACCATCCA TTGGGAAAAC CAGGACGGTT TCGCCGAGAA ATTCCCCGAT
GTCACCCTGA TCCGCACCGT CTTCGTCGAG GACGGCAGCC GGCTGACCGC CGCCGGGGGC
ACCGCCGCCA TCGACCTGAT GCTGCGCCAG ATCGCCCGCG ACCACGGCGC CGAACTGGCG
GGGCGGGTGG CCGACCAGAT GATCCATACC GCGATCCGCT CGGAAGAGGA CCAGCAGCGC
CTGTCCAGCC CGACCCGCAT GGGCGCGCGC CATCCCCGGC TGGCGCAGGT CCTGGCCCGG
ATGGAGGCCA ATATCGAAGA GCCGGTCAGC CCGGCGCGGC TGGCCGCCGA GGCGGGCCTG
TCGCCGCGCC AGCTCGAACG GCTGTTCGCG CGCTATCTCG GCCGCTCGCC CAAGCGCTAC
TATATGGAAC TGCGGCTGGA ACGCGCCCGC CACCTGCTCT TGCAGACCGG GATGAGCGTG
ATGGAGATCG CGCTGGCCTG CGGCTTCGCC TCGACCGCGC ATTTCTCGAA ATGCTACCGT
GCGACCTATG GCTGCACCCC GTATCGCGAA CGCGGCGCGG CGGGCGCCGG CTAA
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| Protein sequence | MPDLDPATPP VPGQITAPSG AQALRYVFLL LDRFTMVSFA AAIEPLRLAN RLAGRELYQW
RLIGEQGETA LCSNGARILL DGPLFETRRD DTVLVCGGLD VARAATRPVL AWLRREARRG
TRIGALCTGA WVLAEAGLLD GRRATIHWEN QDGFAEKFPD VTLIRTVFVE DGSRLTAAGG
TAAIDLMLRQ IARDHGAELA GRVADQMIHT AIRSEEDQQR LSSPTRMGAR HPRLAQVLAR
MEANIEEPVS PARLAAEAGL SPRQLERLFA RYLGRSPKRY YMELRLERAR HLLLQTGMSV
MEIALACGFA STAHFSKCYR ATYGCTPYRE RGAAGAG
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