Gene Pden_3913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3913 
Symbol 
ID4582464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1047397 
End bp1048095 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID639771222 
Productmethyltransferase type 11 
Protein accessionYP_917675 
Protein GI119386620 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.119732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCG GGAATGGCTG GGACGATTCC GCCGAGGCCT GGATCGCCGA CATGGGCGAG 
GAAGGCGATT TCTCGCGCCG CCATGTGCTC GACGCCCCGA TGCTGGCCCG CATCCGCGGC
CGCGGCTTCC GCAATGCGCT GGACGTGGGC TGCGGCGAGG GACGCTTCTG CCGGATGCTT
GCCGCCGAAG GCATCGCCGC GACCGGCATC GATCCCACAC AGAAGCTGAT CGAAACCGCC
CGCAGCCGCG ACGACAAGGG CAGCTACGTG CAGGCGCGCG CCGAGGCCCT GCCCCTGCCC
GATGCCGGTT TCGACCTGGT GGTCAGCTAC CTGACGCTCA TCGACATCGA CGACATCCGG
GCCGCCATCG CCGAGATGGT GCGCGTCCTG CGTCCCGGCG GCAGCCTGCT CGTCGCCAAC
CTGAACTCGT TCAGCACGGC GGGCGGCTGG AAGGGCGATC CCGGCTCGGG CTACCTGATC
GACAACTACC TGGACGAGCG TGCGGAATGG GTCAGCTGGC GCGGCATCCT GATCCGCAAC
TGGCACCGCC CCTTCCACGC CTATATGCAG CCGCTGCTGG AACATGGGCT GCGGCTGGTG
CATTTCGACG AGCCGGCACC GCAAGGCGGC GATCCCCGGC AGGCCGCGCG CTATCGCCGC
GCGCCCTATC TGCATGTCAT GGAATGGGTT CGGGGCTGA
 
Protein sequence
MDRGNGWDDS AEAWIADMGE EGDFSRRHVL DAPMLARIRG RGFRNALDVG CGEGRFCRML 
AAEGIAATGI DPTQKLIETA RSRDDKGSYV QARAEALPLP DAGFDLVVSY LTLIDIDDIR
AAIAEMVRVL RPGGSLLVAN LNSFSTAGGW KGDPGSGYLI DNYLDERAEW VSWRGILIRN
WHRPFHAYMQ PLLEHGLRLV HFDEPAPQGG DPRQAARYRR APYLHVMEWV RG