Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3880 |
Symbol | |
ID | 4582431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1015131 |
End bp | 1015481 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771189 |
Product | chorismate mutase |
Protein accession | YP_917642 |
Protein GI | 119386587 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1605] Chorismate mutase |
TIGRFAM ID | [TIGR01795] monofunctional chorismate mutase, alpha proteobacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.367176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.891954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC ACCCATGCCC CGTGCAGCCA GAATTCCAGC CAGCGGAGAC CCCGATGAGT GACCCGACCG CCCGCGCCGC GGCCCTGCTC AAGGAGCATC GCGCCAGCAT CGACCGGCTG GACGCGATCC TGGTCTATAC GCTGGCCGAA CGCTTCAAGC ACACCCAATC CGTCGGCCGC CTGAAGGCCG AACACGACCT TCCTCCGTCC GATCCCGCCC GCGAGGCGCA GCAGATCGAG CGGCTGGAAC GCCTCGCGCG CGAGGCCGAT CTGGACCCGG AATTCGCGCG CAAATTCCTG AACTTCGTGA TCGCCGAAGT GATCCGGCAT CACGAGACCT TCCAATCGTA G
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Protein sequence | MSDHPCPVQP EFQPAETPMS DPTARAAALL KEHRASIDRL DAILVYTLAE RFKHTQSVGR LKAEHDLPPS DPAREAQQIE RLERLAREAD LDPEFARKFL NFVIAEVIRH HETFQS
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