Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3878 |
Symbol | |
ID | 4582429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1013103 |
End bp | 1014599 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771187 |
Product | signal recognition particle protein |
Protein accession | YP_917640 |
Protein GI | 119386585 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.515054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.639996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAA ACCTGTCCGA CCGCCTTGGC GGCGTCTTCG ACCGGCTGAC CAAGCAGGGC GCGCTGTCCG AGGACGACGT CGCCGCCGCC ATGCGCGAGG TGCGCGTCGC GCTGCTCGAG GCCGATGTCT CGCTGCCCGT CGCGCGCAAT TTCGTCAAGG CGGTGACGCA GAAGGCCACG GGAGCCGCCG TCACCAAGTC GATCACGCCC GGCCAGCAGG TCGTGAAGAT CGTCCATGAC GAGCTGATCA AGGTTCTGCA GGGCGAGGGT GCGCCCGATG CGCTGCGCAT CGACAACCCG CCCGCGCCGA TCCTGATGGT CGGTTTGCAG GGCTCGGGCA AGACCACCAC CACGGCGAAG CTGGCCAAGC GCCTCAAGGA TCGCGAGAAG AAGCGGGTGC TGATGGCGTC GCTGGACACC AACCGCCCGG CCGCCATGGA GCAGCTGGCG ATCCTGGGCC AGCAGATCGG CGTCGATACC CTGCCCATCG TGCCGGGCGA GAATGCGGTG CAGATTGCGA AACGCGCCAA GCAGCAGGCG ACGCTGGGCG GCTATGACGT CTATATGCTC GACACCGCCG GCCGGCTGCA TATCGACGAA GTGCTGATGG ACGAGGTGCA GGCGGTCCGC GACGTGGCCA GCCCGCGCGA GACGCTGCTG GTCGTCGACG GGTTGACCGG CCAGGACGCG GTGAACGTCG CGGCCGAGTT CGACGGCAAG GTGGGCATCT CGGGCGTGGT GCTGACCCGG ATGGACGGCG ACGGCCGCGG CGGTGCGGCG CTGTCGATGC GCGCCGTCAC CGGCAAGCCG ATCCGCTTCG TGGGCCTGGG CGAAAAGATG GATGCGCTGG AGGCCTTCGA CGCGCAGCGC ATCGCCGGCC GCATCCTCGG CATGGGCGAC ATCGTGGCCC TGGTCGAGAA GGCGCAGGAG GTGCTGGAGG TCGAGCAGGC CGAGCGCATG ATGAAGCGCT TCCAGAAGGG CATGTTCAAC ATGAACGACC TGCGGGGCCA GCTTGAGCAG ATGCTCAAGA TGGGCGGCAT GCAGTCGATC ATGGGCATGA TGCCCGGCAT GGGCAAGATG GCCAAGCAGG CCGAGGCCGC CGGCTTCGAC GACAAGGCGA TCAAGCGCCA GATCGCGCTG ATCAACTCGA TGACGAAAAA GGAACGCGCC AATCCCGACC TGCTGCAGGC TAGCCGCAAG AAGCGCATCG CGGCCGGCGC CGGCATGGAA GTGTCCGAGC TGAACAAGCT TCTGAAGATG CAGAAGCAGA TGGCCGACAC GATGAAGAAG CTGGGCAAGA TGGGCAAGGG CGGGCTGCTG AAGCAAGCCA TGCGCGCCAT GACCGGCAAG GGCGGCGGGC TGCCCGACAT GGGCAATGTC GATCCCGAAA AGATGGCCGA GGCGACCAAG ATGCTGCAGG ACCCCAAGGG GCTGGGTGGG CAGTTGGGCG GCATGAACCT GCCCGGCGGG CTCTCGGGCC TGTTCGGAAA GAAGTGA
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Protein sequence | MFENLSDRLG GVFDRLTKQG ALSEDDVAAA MREVRVALLE ADVSLPVARN FVKAVTQKAT GAAVTKSITP GQQVVKIVHD ELIKVLQGEG APDALRIDNP PAPILMVGLQ GSGKTTTTAK LAKRLKDREK KRVLMASLDT NRPAAMEQLA ILGQQIGVDT LPIVPGENAV QIAKRAKQQA TLGGYDVYML DTAGRLHIDE VLMDEVQAVR DVASPRETLL VVDGLTGQDA VNVAAEFDGK VGISGVVLTR MDGDGRGGAA LSMRAVTGKP IRFVGLGEKM DALEAFDAQR IAGRILGMGD IVALVEKAQE VLEVEQAERM MKRFQKGMFN MNDLRGQLEQ MLKMGGMQSI MGMMPGMGKM AKQAEAAGFD DKAIKRQIAL INSMTKKERA NPDLLQASRK KRIAAGAGME VSELNKLLKM QKQMADTMKK LGKMGKGGLL KQAMRAMTGK GGGLPDMGNV DPEKMAEATK MLQDPKGLGG QLGGMNLPGG LSGLFGKK
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