Gene Pden_3792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3792 
Symbol 
ID4582343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp926867 
End bp927484 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content70% 
IMG OID639771101 
ProductDSBA oxidoreductase 
Protein accessionYP_917554 
Protein GI119386499 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.344865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0187029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGCC CCCTTGCCGC AATCGCCCTT GCGCTGCTTT GCGCCCTGCC GCCGGTCCCC 
GCGCAGGCGC AGGACCACAG CCCGGCCGAG GTCGCGGCGA TCAAGGATGC CGTGTTCAAC
GGCCCCGGCC TGCCGGTGAT GGGCAATGCG CAGGGCGATG CGGTACTGGT CGAGTTCTCG
GATTACAATT GCGGCTTCTG CCGGAAAAGC GCGCCGCAGG TCATGGCACT GCTGCAATCG
GACCCGGGGC TGAGGCTGGT GGTGCATGAG ATCCCGATCT TCGGCGAGGG CTCGCGCTTT
GCCGCCGAGG CGGCGCTGGC CGCGCAGGCG CAGGGCAAGT ATGCCGAGTT CCATCGCGCC
CTGATGGCGA TGCGCGGCAA GGCCGAGAAA CCTTCGGTGC TGCGCGTGGC GCGCGAGGTC
GGGCTGGACG TGGCGCGGTT GCAGCGCGAC ATGCAGTCGC CCGAGATCAC CCGGCGGATC
GAGCGCTCGC TGGCGCTGGC CGACGAGATC GGGCTGGTCG GCACGCCCAG CTTCATCGCC
GGCGACCGGG CGATCTTCGG CTATCTGAGC AAGGACGACC TGGCCGAACT GGTGGCCGAG
GCGCGCGCCG CGAAATAG
 
Protein sequence
MLRPLAAIAL ALLCALPPVP AQAQDHSPAE VAAIKDAVFN GPGLPVMGNA QGDAVLVEFS 
DYNCGFCRKS APQVMALLQS DPGLRLVVHE IPIFGEGSRF AAEAALAAQA QGKYAEFHRA
LMAMRGKAEK PSVLRVAREV GLDVARLQRD MQSPEITRRI ERSLALADEI GLVGTPSFIA
GDRAIFGYLS KDDLAELVAE ARAAK