Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3701 |
Symbol | |
ID | 4582253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 850505 |
End bp | 851842 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639771011 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_917464 |
Protein GI | 119386409 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.592545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACC AAGCCAGCAA ACCCGCCCCG GCGGTGAAGA AGCTCTTCAT CAAGACCTAT GGCTGCCAGA TGAACGTCTA TGACAGCCAG CGCATGGCCG AGGCCATGGG CGCCGAGGGC TATGTCCTGA CCGAGAACCA GTCGGACGCC GACATGGTGC TGCTGAACAC CTGCCATATC CGGGAAAAAG CGGCCGAGAA GCTTTATTCC GACCTGGGGC GGCTGAAGCC CCTGAAGGCG GAAAGGCCGG ACCTGAAGAT CGGCGTCGCC GGCTGCGTGG CCCAGGCCGA GGGCGAGGAG ATCCAGCGCC GCATGCCCAT CGTCGACCTG GTGGTGGGGC CGCAGGCCTA TCACCGGCTG CCGGCCATGG CGCGCGCGGG CAGGGGCGTC GATACCGAAT TCCCGGCCGA GGACAAGTTC GAGCATCTGC CGAAGCCCGC CGCCACCAGG CGCGCCCCGG CGGCTTTCCT GACCGTGCAG GAGGGGTGCG ACAAGTTCTG CGCCTTTTGC GTCGTGCCCT ATACGCGGGG GGCCGAGGTG TCGCGCCCGG TCTCGCGCAT CCTGGCCGAG GCGCGCGATC TGGTCGCGCG CGGCGTGCGC GAGATCACGC TTTTGGGCCA GAATGTCAAC GGCTGGCATG GCGAGGGGCC GGAGGGGTCC GAATGGGGTT TCGGCCGGCT GATCCGGGCG ATCGCGGAAA TCGACGGGCT GGACCGCATC CGCTATACCA CCAGCCATCC GAACGACATG GCCGACGACC TGATCGCGGC GCATCGCGAT GAGCCGAAGC TGATGCCCTA TCTGCACCTG CCGGTGCAAT CGGGTTCCGA CCGCATCCTC AAGGCGATGA ACCGCCGCCA CACGGTCGAC CAATACCTGC GGCTGATCGA GCGTATCCGC GAGGCGCGGC CCGACATCAT GCTGACCAGC GATTTCATCG TCGGCTTCCC CGGCGAGACC GACCAGGACC ACCAGGGCAC GCTGGAGCTG GTGCGGGCGG TGAATTTCGG CACCGCCTTC AGCTTCAAGT ATTCGCCGCG TCCCGGCACC CCGGCCTATG AGCGGCCGGA GATCGAGGGT GCCGTGGCCG ATGCGCGCCT GCAGGAATTG CAGGCGTTGC TGACCAGCCA GCAGAAGGCG GCGCAGGAGG GCATGGTCGG GCGCGAGCTG GGCGTGCTGT TCGAGAAGCC CGGCCGCAAT CCGGGGCAGA TGGTCGGCAA GTCGGACTAT CTGCACGCGG TCTTTGTCGA GGCGCCGGCC GCCAAGGTCG GCGATCTGGT GCGCGTGCGC ATCACCCATA GCGCGCCGAA CTCGCTGGCC GGGGTGTTGG CGGCCTGA
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Protein sequence | MSDQASKPAP AVKKLFIKTY GCQMNVYDSQ RMAEAMGAEG YVLTENQSDA DMVLLNTCHI REKAAEKLYS DLGRLKPLKA ERPDLKIGVA GCVAQAEGEE IQRRMPIVDL VVGPQAYHRL PAMARAGRGV DTEFPAEDKF EHLPKPAATR RAPAAFLTVQ EGCDKFCAFC VVPYTRGAEV SRPVSRILAE ARDLVARGVR EITLLGQNVN GWHGEGPEGS EWGFGRLIRA IAEIDGLDRI RYTTSHPNDM ADDLIAAHRD EPKLMPYLHL PVQSGSDRIL KAMNRRHTVD QYLRLIERIR EARPDIMLTS DFIVGFPGET DQDHQGTLEL VRAVNFGTAF SFKYSPRPGT PAYERPEIEG AVADARLQEL QALLTSQQKA AQEGMVGREL GVLFEKPGRN PGQMVGKSDY LHAVFVEAPA AKVGDLVRVR ITHSAPNSLA GVLAA
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