| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3681 |
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| Symbol | |
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| ID | 4582233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 828616 |
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| End bp | 830760 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639770991 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_917444 |
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| Protein GI | 119386389 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.542374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA GCACGAAAGC CGCCCTCGAG GAATGGCGCA GGCTCGCCAG CAAGGAGTTG
AAAGGCGCCG ATCCCGACAG CCTGACCTGG CACACGCTGG AAGGGATCGA GGTCAAGCCG
CTTTATACCG AGACGGACGT GAAGGACCTG CCGCATCTGG GCAGCCTGCC CGGCATCGAG
CCCTTCACCC GCGGCCCGCG CGCCACCATG TATGCCGGCC GGCCCTGGAC CATCCGGCAA
TATGCGGGCT TTTCCACCGC CGAGGAATCG AACGCCTTCT ATCGCAAGGC GCTGGCGGCC
GGGCAGCAGG GCGTCTCGGT CGCCTTCGAC CTGGCGACGC ATCGCGGCTA TGACAGCGAC
CATCCGCGCG TCGAGGGCGA CGTGGGCAAG GCCGGCGTCG CCATCGACAG CGTCGAGGAC
ATGAAGATCC TGTTCGACGG CATCCCGCTG GACAAGGTTT CCGTGTCCAT GACCATGAAC
GGCGCGGTGA TCCCGGTGCT GGCGAACTTC ATCGTCACCG GCGAGGAACA GGGCCATTCC
CGCGCCGTCC TGTCGGGCAC GATCCAGAAC GACATCCTCA AGGAGTTCAT GGTCCGCAAC
ACCTATATCT ATCCGCCCGA GCCCTCGATG CGGATCATCG CGGACATCAT CGAATACACC
TCGAACGAGA TGCCCAAGTT CAACTCGATC TCGATCTCCG GCTATCACAT GCAGGAGGCG
GGCGCGAACC TGGTGCAGGA GCTGGCCTAT ACGCTGGCCG ACGGGCGCGA ATATGTGCGC
GCCGCGCTGA AGGCCGGGAT GGACGTGGAC CAGTTCGCGG GGCGGCTGTC CTTCTTCTTC
GCCATCGGCA TGAATTTCTT CATGGAGGCG GCCAAGCTGC GCGCGGCGCG GCTGCTGTGG
ACGCGCATCA TGAAGGAGTT CGAGCCGAAG AAGCCCGGCT CGCTGATGCT GCGCACCCAT
TGCCAGACCT CGGGCGTCAG CCTGCAGGAG CAGGATCCCT ACAACAACGT GGTCCGCACG
GCCTACGAGG CGATGGCGGC GGCGCTTGGC GGCACGCAGT CGCTGCACAC CAACGCGCTG
GACGAGGCCA TCGCCCTGCC CACCGAGTTC AGCGCGCGGA TCGCAAGGAA CACCCAGCTG
ATCCTGCAAG AGGAAACCGG CATCACCCAT GTCGTCGACC CGCTGGCCGG CAGCTATTAC
GTCGAAAGCC TGACCGCCCA ACTGGCCGAA AAGGCCTGGG CGCTGATCGA GGAGGTCGAG
GCCATGGGCG GCATGACCAA GGCCGTGGCC TCGGGCATGC CCAAGCTGCG CATCGAGGAG
ACCGCCGCGC GCCGCCAGGC CCAGATCGAC CGCGGCGAAG AGGTCATCGT CGGCGTGAAC
AAGTATCGCC TGGCGAAAGA GGACCCGATC GACATCCTCG ACATCGACAA CATGAAGGTG
CGCGACGCCC AGATCGCGCG GCTGAACCGA ATCCGCACGA CGCGGAACGA GGCGACATGC
CAGGCGGCGC TGGCCGAACT GTCGCGCCGG GCGAAGGAAG GCGGCAACCT GCTGGAAGCC
GCGGTCGAAG CCGCGCGGGC GCGCGCTTCT GTAGGAGAGA TCAGCATGGC GATGGAAAAG
GAATTCGGCC GCCACCGCGC CGAGGTCAAG ACCCTGGCCG GCGTCTATGG CGCGGCCTAT
GAGGGCGACG ACGATTTCGC GCAGATCCAG CGCGACGTCG AGACCTTCGC CGAAGAAGAG
GGCCGCCGCC CGCGCATGCT GGTGGTCAAG ATGGGCCAGG ACGGCCATGA CCGCGGCGCC
AAGGTGATCG CCACCGCCTT CGCCGATATC GGCTTCGACG TCGATGTCGG CCCGCTGTTC
CAGACCCCCG AGGAAGCCGC ACAGGACGCC ATCGACAACG ACGTGCATGT CGTGGGGATC
TCGTCGCAGG CGGCCGGCCA CAAGACGCTG GCGCCCAAGC TGATCGCCGC GCTCAAGGAG
CAGGGCGCGG GCGACATCAT CGTGATCTGC GGCGGCGTGA TCCCGCAGCA GGATTACGAT
TTCCTCAAGA AGGCCGGGGT AAAGGCGATC TTCGGGCCGG GGACCAACAT CCCCTCGGCC
GCGCGCGACA TCCTGTCGCT GATCCGCGCG GCGCGGGCGG CGTGA
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| Protein sequence | MTESTKAALE EWRRLASKEL KGADPDSLTW HTLEGIEVKP LYTETDVKDL PHLGSLPGIE
PFTRGPRATM YAGRPWTIRQ YAGFSTAEES NAFYRKALAA GQQGVSVAFD LATHRGYDSD
HPRVEGDVGK AGVAIDSVED MKILFDGIPL DKVSVSMTMN GAVIPVLANF IVTGEEQGHS
RAVLSGTIQN DILKEFMVRN TYIYPPEPSM RIIADIIEYT SNEMPKFNSI SISGYHMQEA
GANLVQELAY TLADGREYVR AALKAGMDVD QFAGRLSFFF AIGMNFFMEA AKLRAARLLW
TRIMKEFEPK KPGSLMLRTH CQTSGVSLQE QDPYNNVVRT AYEAMAAALG GTQSLHTNAL
DEAIALPTEF SARIARNTQL ILQEETGITH VVDPLAGSYY VESLTAQLAE KAWALIEEVE
AMGGMTKAVA SGMPKLRIEE TAARRQAQID RGEEVIVGVN KYRLAKEDPI DILDIDNMKV
RDAQIARLNR IRTTRNEATC QAALAELSRR AKEGGNLLEA AVEAARARAS VGEISMAMEK
EFGRHRAEVK TLAGVYGAAY EGDDDFAQIQ RDVETFAEEE GRRPRMLVVK MGQDGHDRGA
KVIATAFADI GFDVDVGPLF QTPEEAAQDA IDNDVHVVGI SSQAAGHKTL APKLIAALKE
QGAGDIIVIC GGVIPQQDYD FLKKAGVKAI FGPGTNIPSA ARDILSLIRA ARAA
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