Gene Pden_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3680 
Symbol 
ID4582232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp828021 
End bp828509 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content70% 
IMG OID639770990 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_917443 
Protein GI119386388 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.570513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGC GTCCTGTTGC CGAGGGGGAT ATTCCGGCGA TGCTGGCGTT CTGGAACCCG 
CTGATCCGCG AGACCACGAT CACCTTTTCC AGCGAGGAGA GGACGGCAGA GGGGCTGGCG
CGGATGATCG CCGACCGCCG GGCCGCCGGG CGGGCGTTCC TGGTCGCCGA AGAGGCGAGC
ACGGTGCTGG GACTGGCGAG CTACGACCAG TTCCGCGGCG GCAACGGCTA TGCCCATTGC
ATGGAGCATA CCGTCATCCT GTCGCCCGCC GCGCGCAGGC GCGGGGTCGG CCGGGCGCTG
ATGGCGGCGC TGGAGGACCA TGCCCGCACC GCCGGCTCGC ACAGCATGAT TGCCGCCGTC
TCGGCCGAGA ACGAGGCCGG CATCGCCTTT CACCGCGCCA TTGGCTACGT GCCGGTCGGG
CTGTTGCCGC AGGCGGGGCG CAAGTTCGGC CGCTGGCTGG ACCTGGCGCT GCTGCAAAAG
ATCCTCTGA
 
Protein sequence
MMLRPVAEGD IPAMLAFWNP LIRETTITFS SEERTAEGLA RMIADRRAAG RAFLVAEEAS 
TVLGLASYDQ FRGGNGYAHC MEHTVILSPA ARRRGVGRAL MAALEDHART AGSHSMIAAV
SAENEAGIAF HRAIGYVPVG LLPQAGRKFG RWLDLALLQK IL