| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3644 |
|---|
| Symbol | |
|---|
| ID | 4582196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 794966 |
|---|
| End bp | 795748 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639770954 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_917407 |
|---|
| Protein GI | 119386352 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3821] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00251577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.378344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGA ATACATCCCT GCCCGGCCCG CCGATCTTCG ACCCCGCCAT CTTCGGCCCC
CTCTCGCTGG CCGACCTCGC AGCCCTGCTA TGGCTGTTCC TGGCTTGGTT CGGCATCGGC
TGGATCACCG AGCATCCGCC CCGGGCCCAT CCTTCGGTCA CGGTGCTGAT GAAGGCGCAT
CGCCGCGAAT GGATGCGACA ATTCATCACA CGCAATCCGC GCATCTTCGA CAGCGCCATC
CTGACCACGC TGCGCGAGGG CACGTCCTTC TTTGCCTCGG CCTGCCTGAT CGCGGTGGGC
GGCGGGCTGG CGCTGATCGG CAATACCGAC CAGCTTGCCG GCGTGGCGCG GCAGTTCGAC
CTGGGCCATG TGCCGACGCT GAAATGGGAA ATCAAGATCG TCGTGGTGCT GTTCTTCGTG
GCCAACGCGC TCTTGCGCTT CGTCTGGTCG CACCGGCTGT TCGGCTATTG CGCGATCATC
ATGGCCTCGG TCCCCAACGA GCCCGAAGAC GCACGCGCCA TGCCGCTGGC GATGCAGGCG
GCCGACATCA ACATCACCGC GGCGAAAAGC TTCAACTCGG GGCTGCGCTG CGTCTATTTC
GCGCTGGGGG CACTTGGCTG GCTGGCAGGA CCGCTGGGGC TGTTCCTTGC CACCAGCTAT
GTGCTGCTCA TCTCGTGGCG GCGGGAATTC GCGTCACACT CGCGCCGGGC GATCATGCAG
TTGGTACCCG GAGAGACGGG CCTGCCGCCA GGCAAGGCCG AGGGCGAGCA GACCGGCCCC
TGA
|
|---|
| Protein sequence | MDPNTSLPGP PIFDPAIFGP LSLADLAALL WLFLAWFGIG WITEHPPRAH PSVTVLMKAH
RREWMRQFIT RNPRIFDSAI LTTLREGTSF FASACLIAVG GGLALIGNTD QLAGVARQFD
LGHVPTLKWE IKIVVVLFFV ANALLRFVWS HRLFGYCAII MASVPNEPED ARAMPLAMQA
ADINITAAKS FNSGLRCVYF ALGALGWLAG PLGLFLATSY VLLISWRREF ASHSRRAIMQ
LVPGETGLPP GKAEGEQTGP
|
|---|
| |