Gene Pden_3636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3636 
Symbol 
ID4582188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp786419 
End bp787054 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content63% 
IMG OID639770946 
ProductOmpW family protein 
Protein accessionYP_917399 
Protein GI119386344 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.779637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.905473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACAAG AAGAGAGGAT CGCCATGAGA CACAAGCTTG CCATTGCCGC GGCGCTCGCC 
GTGCTTGCTT CGCCCGCGCT TGCGCAATCG CAGGGTGATT GGACGCTCGG CTTCGGGATC
GCAAACGTGA ACCCGAAATC GGACAACGGG ACGCTGGCGG GGGGCACGGT GCCGGTCAGC
ATCGACGACA ACACGCGCCC CAGCATCACC TTCGAATACT TCATCCGCGA CAATATCGGC
ATCGAGGTGC TGGGCGCCCT GCCCTTCAAG CATTCGATCA AGTCGAACGG GACCGAGATC
GGCACGGTCA AGCACCTGCC TCCGGTCGTT TCGCTGCAAT ATCACTTTGA CGCGCATCCG
CGCTGGAAGC CCTTTGTCGG CCTGGGCGTG AACTTCACCG GCTTCTGGGA CGGCGAAGCC
AAGGGTCCGC TGGCCGGCAG CGATCTGCGG GTCAAGAACA GCTGGGGCCT GGCCGCGCAT
CTGGGCGTGG ATCACTGGAT CAACGAGCGC TCGGCCCTGC GCGCCGACCT GCGCTGGATC
GACATCGGCG CCGATGTCGA GCTGAACGGC CAGAACATCG GCACGGTCGA TGTCGATCCG
GTCGTGGTCG GCATCAGCTA TGTGATGAAG TTCTAG
 
Protein sequence
MRQEERIAMR HKLAIAAALA VLASPALAQS QGDWTLGFGI ANVNPKSDNG TLAGGTVPVS 
IDDNTRPSIT FEYFIRDNIG IEVLGALPFK HSIKSNGTEI GTVKHLPPVV SLQYHFDAHP
RWKPFVGLGV NFTGFWDGEA KGPLAGSDLR VKNSWGLAAH LGVDHWINER SALRADLRWI
DIGADVELNG QNIGTVDVDP VVVGISYVMK F