Gene Pden_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3620 
Symbol 
ID4582172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp773306 
End bp773869 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content69% 
IMG OID639770930 
Productadenine phosphoribosyltransferase 
Protein accessionYP_917383 
Protein GI119386328 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID[TIGR01090] adenine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGC CCGCCGGAAA GCGCCGCCGC GACAGCCGCA CGGTGCGCGA CTACATCCGC 
ACCATCGTCG ATTTCCCGCA TGAGGGGATC CTGTTTCGCG ACGTGACCAC GCTTTTCGCC
GATGCGCGCG GCTTTCGCAT GGCGGTGGAC CAGCTTCTGG CCGCCTATGC CGGCGAGGAT
ATCGACAAGG TGGTGGGACT GGAGGCGCGC GGCTTCATCC TGGGCGGCGC GGTGGCGCAT
CAGCTTTCGG TAGGCTTCGT GCCGATCCGC AAGAAGGGCA AGCTGCCCGG CGCCGTGATC
AGCCAGGCCT ATGCGCTGGA ATATGGCAAG GCGGTGATGG AAATCCATGA CGACGCGCTG
AAACCGGGCG AGCGGGTGCT GATCGTCGAC GACCTGCTGG CCACCGGCGG CACCGCGGCG
GCCGGCATCT CGCTTTGCGG ACGGCTGGGG GCCGAGGTCG TGGGCTGCGC CTTCGTGATC
GAGCTGCCCG AGCTGGGCGG ACGGGCGCTG CTGGAGGGGC TGGGCCACGA GGTCCACGCC
CTGACCGCCT TCGAGGGCGC CTGA
 
Protein sequence
METPAGKRRR DSRTVRDYIR TIVDFPHEGI LFRDVTTLFA DARGFRMAVD QLLAAYAGED 
IDKVVGLEAR GFILGGAVAH QLSVGFVPIR KKGKLPGAVI SQAYALEYGK AVMEIHDDAL
KPGERVLIVD DLLATGGTAA AGISLCGRLG AEVVGCAFVI ELPELGGRAL LEGLGHEVHA
LTAFEGA