| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3580 |
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| Symbol | |
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| ID | 4582133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 732596 |
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| End bp | 733354 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639770891 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_917344 |
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| Protein GI | 119386289 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC TTCCCGATTT CTCGTTGAAG GGCAGGGTCG CGCTGGTCAC CGGCGCCGGT
CGCGGCATCG GGCGCGCCAT CGCCGAGGTC TATGCACAGG CGGGGGCCGA GGTCGTCCTT
TGTGCCCGCA GCCGGACCGA GATCGCGGAA GTCGCCCAGG CGCTGGTCGA GCAAGGCTTC
AAGGCTCGCG CCATCCCCTG CGACGTGACC GATGTCGCGG ATTTCCGCGC GCTGGCCGAT
GGGTTGGAAC GCCTGGACAT CTTCGTCAAC AACGCCGGCA CCAATCGCCC GCGCCCGCTG
GTCGATGTCA CCGAAGAGGA TTTCGACGTC ATCGCCGGGC TGAACCTGCG CGCAGCCTTC
TTTGCGTTGC AAAGCGTGGC GCGGCGGATG CGCGACCTGG GGCGGGGTGG GTCGATCATC
AACATGTCCT CGCAGATGGG GCATATCGGC GCGGCGGATC GCTCGGTCTA TTGCGCGACG
AAATGGGGGA TCGAGGGGCT GACCAAGGCC AGCGCCATCG AGCTTTCGCC TTTCCGCATC
CGCGTGAACA CGATCTGCCC CACCTTCATC GAGACGCCGC TTACCAGGCC CTATTTCGAT
GATCCTGCCT TCCGCGAGCA TTGCCTGCGC ATGATCAAGC TGGGCCGCGT GGGGCAGGTG
GGCGATATCG TCGGTGCGGC GCTTTACCTG GCATCCGATG CGTCGGCCCT GATGACCGGC
AGCGCCGTGA TCCTGGATGG CGGCTGGACG GCCGAATAA
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| Protein sequence | MTPLPDFSLK GRVALVTGAG RGIGRAIAEV YAQAGAEVVL CARSRTEIAE VAQALVEQGF
KARAIPCDVT DVADFRALAD GLERLDIFVN NAGTNRPRPL VDVTEEDFDV IAGLNLRAAF
FALQSVARRM RDLGRGGSII NMSSQMGHIG AADRSVYCAT KWGIEGLTKA SAIELSPFRI
RVNTICPTFI ETPLTRPYFD DPAFREHCLR MIKLGRVGQV GDIVGAALYL ASDASALMTG
SAVILDGGWT AE
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