Gene Pden_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3536 
Symbol 
ID4582091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp685290 
End bp686033 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content65% 
IMG OID639770849 
ProductGntR family transcriptional regulator 
Protein accessionYP_917302 
Protein GI119386247 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCAGG CACATACCAG CACCGAAGTG GCGACGCAGA AGCTGCGCGA GGCGATCCTC 
AGCGGCGAGC TCTTGCCGGG CGACAAGCTG CACCAGGACC GGCTGGCGGA AATGCTGGGC
ATCTCGCGCA CGCCCTTGCG CGCCGCACTG ACGGCGCTGG CGCAAAAGGG ACTTGTCTCA
TACGCGAGCA ATCGCGGCTT CTATGTGCGC GAGTTCTCGT TTGCCGAAGT GTCCGGCGCC
TTCGAGGTGC GCGCCGAGCT GGAGGCGCTG GCCTGTCGCC TGGCCGCCGG CAACATGACG
GACGAGGCGC GACGCCACCT GGCCGATCTG GTGGCCGAGG GCGACAGGCT CCTGAGCCCC
GGCGCGTTGC TGCCCGAAAA CCTGGCCGAC TATCGCCGGA TGAACGTGAA TTTCCACACC
GCGGTGATGG CGCTTTCCGG CAATGCCTGG ATCATGGAAT TCGTGCAAAG CCTCCACAAC
GTGCCCGCCG CATCCGACCG CGTGATCATG TGGCGCGATT TTCGCGTGCT CGAACGATCC
CATGACGATC ACCACCGCAT CGCCCATGCC CTCTCCAAGG GCCAGGGCGA ACGCGCGGCC
GCCCTGATGC GCGAGCACAT CACCTTCGCG CTGGAGCATC TGCACGAGCA GATGAAGCTC
TACCCGCAGG ATTTTCTGCG CATGCCCAGC TTTGACAAAC CCGCAAAAGG CCGAAGCGGC
CAACGCAACC GGAGGACCAC CTGA
 
Protein sequence
MSQAHTSTEV ATQKLREAIL SGELLPGDKL HQDRLAEMLG ISRTPLRAAL TALAQKGLVS 
YASNRGFYVR EFSFAEVSGA FEVRAELEAL ACRLAAGNMT DEARRHLADL VAEGDRLLSP
GALLPENLAD YRRMNVNFHT AVMALSGNAW IMEFVQSLHN VPAASDRVIM WRDFRVLERS
HDDHHRIAHA LSKGQGERAA ALMREHITFA LEHLHEQMKL YPQDFLRMPS FDKPAKGRSG
QRNRRTT