| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3527 |
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| Symbol | |
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| ID | 4582082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 676659 |
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| End bp | 678743 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639770840 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_917293 |
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| Protein GI | 119386238 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGA TTCATCTCAG GCGGCTTGCG CAAGGGGTCG GCCCGATCCC GCTTCTTGCC
GCGCTTTCCG CCCTGCCCTT GCAAGCACAG GAAACGGACC AGGCTCCCCT TGTCCTGGAT
ACGGTCATCA TCACCGGCGA CAACATCACG CGCGACATGA TGCAGACCGC CAGTTCGGTC
TCGGTCGTGA CCGCCCGGCA GTTGGAAAGG GAAAAGGCCG GCAACGACGA GCTGCGCACC
GCCATCGCCG GAACGGCCAA CGTGATCTAT ACGGACAATG TCAGCACCCC GGTCATCCGG
GGCCAGGACG CGCAGGGTCC GCATACCGGC GCCAACGCCT TCTTCGCCGG CTCGGTGCCG
CGGGCGACGA TCAACCTGGA CGGCCATTAT CTCAGCTATA ACGAGCTGTA TTTCGGCGCC
ACCTCGACCT GGGACGTGGA CAGCATCGAG GTGTTCCGGG GGCCGCAGAC CACCTCGCAA
GGGGCGAATG CCATCGCCGG CGCGATCATC GTCAGCACCC GGGATCCCAG CTTCACGCCC
GAAGGCGCCT ATCGGCTGGA GGGCGGCAAC TACAACCAGC GCGCCGCCTC GTTCATGTGG
TCGGGGCCGC TGACCGACGA ACTGGCTGCG CGGGTCTCGC TGGACTATTC CGCCCGCGAC
AGCTTCATCG ACTATGTCAG CCCGACCTTC GTGCAGAACG AGATCGGCCA GGATTTCGTG
AACGCCAATG CGCGCGTCAA GCTGTTGTGG CAGCCGGCCG AGCTTGCGGG CCTGTCCGCC
AAGCTGACCT ACAGCCACAG CCGGATGCAG CGCCCCAGCG CCGAAGGCGC CTCGGAACCC
TATGACGAGC TGGAGTCCAT CGCCACCTGG ATGCCCGGCT GGGACCAGAC CACCGATACC
GCGATCCTGG ATGTGGATTA CGACACCGGC AACGGCATGG TGCTGAGCAG CAAGACGCAA
TACTCGACCT CGGATGTCGA GCGCCGCATC GGCACGGTGA ACATGGGCGA TGCGGATGTG
TCGCAGGACA ATTACTCGAA CGAAAGCAAG CTGACCTTCG GCACGCCGGA CGACCGGCTC
AGCGGCGTGG CCGGCATCTA TGTCGCCTTC ACCGACCAGG ACGAAACGCT GGAACAGGGC
GGGCTTTCGA CCTTCAGCGA CAAGAAGTCG AACCTGGGAC TCTACGGCGA GCTGAACTGG
CGCATGGACG AACGCTGGAC GCTGTCGGCC GGGCTGCGCT ATCAGCGCGA CCACATCCGC
AGGCAGGGCG ATGTCTCGCC GCTGTTCGCC AACAGCGACG TGGACTACGA CCACACCTTC
GACGTGCTGC TGCCCAAGCT GACGCTGGCC TATCAGGCGA CGCCAGACTG GACGGTCGGT
GCGCTGGTCA GCAAGGGCTA CAACCCCGGC GGCATCTCGC TGGATTTCGG CTATTCCAAG
GAATGGACCG AGTTCGACGC CGAGACCGTC TGGAACTATG AGCTGTTCAC CCGGGCCGAG
CTGATGGAGG GGCGGCTCGC GCTGACCGGC AACCTGTTCT ACATGGACTA CCAGAACGCC
CAGCACAACA TCGCGCATCT GGTCGATGGC GTGACCTATC TGCAGACGGT GAACGCGCAG
GACGCAAGGG CCTATGGGCT GGAGCTTGGC GCCGATTACC GCGCGACCGA TGCGCTGACG
CTGCGCGGCA GCCTTGGCCT GCTGCATACC GAATTCGAGC GTTTCGACCA GATGCCCGCC
TATGAGGGCA ACGAATTCGC CCGCGCGCCC GGCAAGATGC TAACCCTTGG CGCAAGCTGG
GATGCGACGG ACAGGCTGAA CCTGGGCGGA CAGGTGCGCT ATGTCGACGG CTACTACTCG
AACACCGCCA ACACCCCCGC CTATGAGGTG GACGGCTTCA CGCTGGTCGA TGTGCAGGCC
AGCTACCAGG TCAATGACAG GGTCGCGCTT TACGGCTATG TCAACAACCT GCTGGACGAA
CGCACGCCGA CGCTGCTTGA ACCGGCGCGG GGGAATGTGG TCTTTACCCA GGGCAGCCTG
ACCTCGCCCC GCATGGTGGG GATCGGCATC CGCGGCACCT TCTAG
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| Protein sequence | MSKIHLRRLA QGVGPIPLLA ALSALPLQAQ ETDQAPLVLD TVIITGDNIT RDMMQTASSV
SVVTARQLER EKAGNDELRT AIAGTANVIY TDNVSTPVIR GQDAQGPHTG ANAFFAGSVP
RATINLDGHY LSYNELYFGA TSTWDVDSIE VFRGPQTTSQ GANAIAGAII VSTRDPSFTP
EGAYRLEGGN YNQRAASFMW SGPLTDELAA RVSLDYSARD SFIDYVSPTF VQNEIGQDFV
NANARVKLLW QPAELAGLSA KLTYSHSRMQ RPSAEGASEP YDELESIATW MPGWDQTTDT
AILDVDYDTG NGMVLSSKTQ YSTSDVERRI GTVNMGDADV SQDNYSNESK LTFGTPDDRL
SGVAGIYVAF TDQDETLEQG GLSTFSDKKS NLGLYGELNW RMDERWTLSA GLRYQRDHIR
RQGDVSPLFA NSDVDYDHTF DVLLPKLTLA YQATPDWTVG ALVSKGYNPG GISLDFGYSK
EWTEFDAETV WNYELFTRAE LMEGRLALTG NLFYMDYQNA QHNIAHLVDG VTYLQTVNAQ
DARAYGLELG ADYRATDALT LRGSLGLLHT EFERFDQMPA YEGNEFARAP GKMLTLGASW
DATDRLNLGG QVRYVDGYYS NTANTPAYEV DGFTLVDVQA SYQVNDRVAL YGYVNNLLDE
RTPTLLEPAR GNVVFTQGSL TSPRMVGIGI RGTF
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