Gene Pden_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3525 
Symbol 
ID4582080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp674203 
End bp675066 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content72% 
IMG OID639770838 
ProductABC transporter related 
Protein accessionYP_917291 
Protein GI119386236 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG ACCACCGACT GATCGCCGAG CATCTGACCG CCGGCTATGG CGATGCCGCC 
ATCCTGCGCG ACCTGGACCT TGCCGTCGCG CCGGGCCGGA TCACCGCCAT CGTCGGGGCC
AATGCCTGCG GCAAGTCCAC GCTGCTGCGC AGCCTGTCGC GGCTGCTTGC CCCCGCGCAG
GGGCAGGTGA CCCTGGACGG CCGCGCCATC CACCGCATTC CCGCGCGCGA ACTGGCCCGC
ACGCTCGGTC TCTTGCCGCA GTCGCCCATC GCGCCCGAGG GCATCACCGT GGCCGAGCTG
GTCGGCCGCG GCCGGCATCC GCATCACGGG CTGATGACGC GCTGGAGCGC CGAGGACGAC
CGCGCCGTCG CCGCCGCGCT GGATGCGACC CAGACCGCCG AGCTGGCCGA GCGCCCGGTG
GACGAGCTTT CCGGCGGCCA GCGCCAGCGC GTCTGGATCG CCATGGCGCT GGCGCAGCAG
ACCGGCATCC TGCTGCTGGA CGAGCCGACG ACGTTCCTGG ACGTCAGCCA CCAGGTCGAG
GTGCTGGACC TGCTGGTCGA TCTGAACATG ACGCGCGGCA CCACCATCGT CATGGTGCTG
CACGACCTGA ACCTGGCGGC GCGCTATGCC GATCTGCTGG TGGCGATGCG CGAGGGCCGG
CTCTACGCCT CGGGTCCGCC CGAGGAGGTG CTGACCGCCG GCACCCTGCG CGCCGTCTTT
GGGCTGGACA GCCGCGTGGT GACCGATCCC ATTTCGGGCA AGCCGATGAT GCTGCCCATA
GGTCGGCACC GTGTCGGGAC AAGCGGCCCG ACCGCCGCAT CGGCCATGCC GGAAGGCACC
TTGCACGACG ACCCGATGCG CTAG
 
Protein sequence
MTADHRLIAE HLTAGYGDAA ILRDLDLAVA PGRITAIVGA NACGKSTLLR SLSRLLAPAQ 
GQVTLDGRAI HRIPARELAR TLGLLPQSPI APEGITVAEL VGRGRHPHHG LMTRWSAEDD
RAVAAALDAT QTAELAERPV DELSGGQRQR VWIAMALAQQ TGILLLDEPT TFLDVSHQVE
VLDLLVDLNM TRGTTIVMVL HDLNLAARYA DLLVAMREGR LYASGPPEEV LTAGTLRAVF
GLDSRVVTDP ISGKPMMLPI GRHRVGTSGP TAASAMPEGT LHDDPMR