Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3521 |
Symbol | |
ID | 4582076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 668767 |
End bp | 670866 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639770834 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_917287 |
Protein GI | 119386232 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATTG AACCCCGATT CAGAAATGCC CGGCCCCGCT GCCTGACCGC CGCATTGCTG GGCTGCACCG CGCTGGTCGC CGCCTTCCAG CCCCAGGCGG TGCATGCCCA GGACAACCGC AGCATCGTTC TGGACACCGT CGTCATCGAG AGCAACCGCA CCGACGACGA CGCAGGCTCG ATCGTCGCGA CCCGGACGAT GGCGGGCAGC AGGATGGCGA CGGATGTGCT GGACACGCCC GCCTCGGTCT CGGTCATCAC CAGCAAGGAG ATCCGGCAGC GCGGCGCGGA AACCGTCGAG CAGGTGCTGC GCTATACCGC CGGCGTCACG ACCGACTTCT ACGGCGGCGA CGACCGCTTC GACTATTACA AGCTGCGCGG CTTCGACGCC TCGGTCTATC GCGACTGGCT GCCGATGCAG AAGGCGTTCG GCGGCATCCG CGAGGACGCC TTTGCCTATG AGCGGGTCGA GGTGGTCAAG GGCGGCAACT CGACCGTCGG CGGTCCCTCG GAACCCGGCG GCGCGGTGAA CTATGCCACC AAGCTGCCCC GCACCCAGCG GTTCGGCGAA GCCTATGTGA CCGCCGGATC CTTCGACCAC CGCGAGGTCG GGGTCGATTT CGGCGACAAC CTGACCAGGG ACGGCACGCT GTCATGGCGC CTGACCGGCC GGGTGCAGAG GGCGGACAAG GAGCTCGACT ACAGCAAGAA CGACGCCAGC CTGCTGATGG GCGGCCTGAC CTGGCGGCCC AGCGACCGGA CCTCGCTGAG CGTGGTGCTG GATTACATGA AGCGCGACGG CTCGACCGGA TCGGGCTTTC CGCCGGGCAC GAACTTTTCG CGCGACCGCT TCTTCGGCGA GCCGGATTTC AACTATCTGG AGAACGAGCG CACATCGCTG AGCGTGCTCT TCGACCATGA TTTCGGCAAT GGCCTGAAAT TCGGGGCCAA TGCGCGATAC AGCGACGAGG ACCGCGGCTT CGGCTATGTC TATATCTGGG ATGCCGACGG CCTGAACCCG GCGGACCGCT ATTATTTCGC CAACGCCTCT TCGGCCGAGC AGTTCGCGGC GGACGTGCAT CTGCAATACG ACGCAGATTT CGGCACCGTC GGCAGCCGCA CGCTGGTCGG CCTGCAATAC AGCGACATCT CGGCCGATTC GAGGACCTGG TATGCGCCGG CTTCATCGAT CGACTACACC GACCCGGTCT ATACCGGCGG GCTCGATCTG GACGCGCTCG CCCCCTATAC CGGGACCAGG ACCGACGACA GCATCGCCTC GATCTACCTG CAGGAAGAGC TGACCTTCTC GGACCGGCTG ATCGCCACCA TCGGCCTGCG CCACGACCGG ATGGACCTGT CGCGCACGGC GCTTGACGGA ACCAGGACCC AGGCCGATTT CAACAAGACC ACCTCGCGCC TGGGCCTGAC CTACAAGATC ACCCCCGAGC TTTCGACCTA TTTCAGCTAT GCCGAATCGG TGCTGCCCGC CGCTTTGACC GTCGAGCCCG AGGAAGGCGA GCAATACGAA CTGGGGATGA AATACCGTCC GGCCGCCATG AACGCATTGT TCACGGCGGC GGTCTATGAC CTGCGCAAGA CAAATATCAC CCGGCAGGAC ACCTCCGAGA ACCCGCCCGT GCCCCGCACC ATCGGCGAAA TCCGGGCCCG CGGCATCGAG CTGGAGGCGC GGGCCGAGAT CTCGCCCGAA CTGAACCTGA TCGCGGCCTA TTCCTATACG GATACCGAGA TCACCGACCG GCTGTCGCCC AACCAGGGCA ACAGTCTGGG CAACGTCCCG CGGCATCTGG CCTCGGTCTG GATGGACTAT ACGCTGCAAG GCCACGGTGC CCGCGGCGAC ATGACCTTCG GCATCGGTGC ACGCTACAAG GGCACGGCCT ATAACGGCGA TGACAACGGC TCCAAATCAG ATGCCGCGGT GCTGATCGAT GCCGCCTACA GCTATGCCCT GCGCAAGGAC ACGGTGCTTT CGGTCAATGT GACCAACCTG CTGGACGAAA AGCATCGCGA GGCCGCCTCG GGCGCCATCA CCTACAATCC CGGCCGCGAG ATCACCGCCA CGTTGCGCCG GACCTGGTAA
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Protein sequence | MPIEPRFRNA RPRCLTAALL GCTALVAAFQ PQAVHAQDNR SIVLDTVVIE SNRTDDDAGS IVATRTMAGS RMATDVLDTP ASVSVITSKE IRQRGAETVE QVLRYTAGVT TDFYGGDDRF DYYKLRGFDA SVYRDWLPMQ KAFGGIREDA FAYERVEVVK GGNSTVGGPS EPGGAVNYAT KLPRTQRFGE AYVTAGSFDH REVGVDFGDN LTRDGTLSWR LTGRVQRADK ELDYSKNDAS LLMGGLTWRP SDRTSLSVVL DYMKRDGSTG SGFPPGTNFS RDRFFGEPDF NYLENERTSL SVLFDHDFGN GLKFGANARY SDEDRGFGYV YIWDADGLNP ADRYYFANAS SAEQFAADVH LQYDADFGTV GSRTLVGLQY SDISADSRTW YAPASSIDYT DPVYTGGLDL DALAPYTGTR TDDSIASIYL QEELTFSDRL IATIGLRHDR MDLSRTALDG TRTQADFNKT TSRLGLTYKI TPELSTYFSY AESVLPAALT VEPEEGEQYE LGMKYRPAAM NALFTAAVYD LRKTNITRQD TSENPPVPRT IGEIRARGIE LEARAEISPE LNLIAAYSYT DTEITDRLSP NQGNSLGNVP RHLASVWMDY TLQGHGARGD MTFGIGARYK GTAYNGDDNG SKSDAAVLID AAYSYALRKD TVLSVNVTNL LDEKHREAAS GAITYNPGRE ITATLRRTW
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