Gene Pden_3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3511 
Symbol 
ID4582066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp655815 
End bp656942 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content69% 
IMG OID639770824 
Producthypothetical protein 
Protein accessionYP_917277 
Protein GI119386222 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCG GAAAGGCCGT CGCGCTGCGC CGCCGCGATG CCCTGCGCCA CCTGCTGCAT 
CCGCGCCAAC TGACGGACAG CATGGCGCTG TCGAAGCAAC CTTCCCTGCG AAACTCGGTG
CTGGCCGGGG CGCAGGCCGC AATCACCGCG GCCATCGTGC TGCCGCTCGT CCACCTGTCG
CCCTGGCCGC ATCTCATCGG CTTTGCCTCG CTCGGGGCGC TCGTGGCCCT GTTCGGCCGC
TTCGCACCGG CGCAAGGCCG CAAGCGGATC GTGTTCCTCT GCGCGCTCTG GCAGGTGCTG
GCGGTCCTTG CCATGTCCGG CCTTGCCTGG CTGGGCGCCC CGGTCGTCAT GCAACTGGTC
CTGCTGGCGC TTTCCTGCGG AGTCTTTCTG TTCGTCTGCA CGACCGGCGG GTTCGGCGCG
CCCGGCGCGC TGATCTTCGT CTTTGCGGCC GGTGCCTCGA TGTCCGCGGA CCTGAGTCTC
GAGCAATTGG TCGCGCGCGT ATCGGCGACG GCAGCGGCGG CGGCGCTCGC CTGGGCGATC
TGCGCCGCGA CCGAGGGCTT GCGCCACCTG CCCACCGCGA TGCGCCCGTT TCCGGCAGAA
CCGCAGCACC CGCTGAACCA TCGCCTGTCG GCAGCGTCGC GCAGCGCTGC CGGAGCCGGA
ATCGCGATCC TTGCGAGCCA TGCCTTTGGC GCGAACCACC CGGCCTGGGC CGCGATGGGC
ACGCTGGCGG TCATGCAGGG GGCGCATCTT CACATCACGA TGAGCCGGGC GATGCAGCGC
ATGGCCGGGA CGGTCCTTGG GGCCATGCTG GCCTGGACCC TTTTGCTGCA AGAGCCCTCG
GTCTGGGCCA TGATCGCCGT GCTGGCGATG CTTCAGCTGC TGACCGAAGT CGTGATCGGC
ATCAACTATG CCTTCGGCCA GGTGTTCGTC ACCCCGATGG CGCTGCTGAT GACCCATCTC
GGCACCCCGC ATGGCGCCGG GCCGGACATC GCGCCAGAAC GCGTGTTCGA CACGCTTCTT
GGTGCCGTGA TCGGCATCGC GATGTCGGTC CTGCTGTCGA CGGTCGACGA CCGCCGGCAC
CTGGCGGTGC TGAGGAATGG TGCCAGGATG GGCGGATCGA AACCATAA
 
Protein sequence
MMAGKAVALR RRDALRHLLH PRQLTDSMAL SKQPSLRNSV LAGAQAAITA AIVLPLVHLS 
PWPHLIGFAS LGALVALFGR FAPAQGRKRI VFLCALWQVL AVLAMSGLAW LGAPVVMQLV
LLALSCGVFL FVCTTGGFGA PGALIFVFAA GASMSADLSL EQLVARVSAT AAAAALAWAI
CAATEGLRHL PTAMRPFPAE PQHPLNHRLS AASRSAAGAG IAILASHAFG ANHPAWAAMG
TLAVMQGAHL HITMSRAMQR MAGTVLGAML AWTLLLQEPS VWAMIAVLAM LQLLTEVVIG
INYAFGQVFV TPMALLMTHL GTPHGAGPDI APERVFDTLL GAVIGIAMSV LLSTVDDRRH
LAVLRNGARM GGSKP