| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3494 |
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| Symbol | |
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| ID | 4582049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 640153 |
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| End bp | 640863 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639770807 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_917260 |
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| Protein GI | 119386205 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0426401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.193987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTG TCGATGCACG GGCCAACCGC CCGCAATACC TGCAGGAAAC CGCGTCGCAG
ACCGCCGGCC CCTATGTCCA TATCGGGCTG GCGCCGGGGG CGGCGGGCTT TCGGATCTTC
GACCGCGAAC TGGGCTGGGA CATTGCCGGA CCCAATGCCG CGGGCGAACG CATCCGGGTC
GAGGGCGTGG TGATCGACGG CACCGGCAGC CCGGTCAAGG ACGTGCTGAT CGAGGTCTGG
CAGGCCAATG CCGCCGGCAT CTATGCCCAT CCCGAGGCGG GCGGCGAGGT CGAGGAGGGC
TTTCGCGGCT GGGGCAGGGT CATCACCGAT TTCGAGACCG GCGAATGGGG CTTTGACACC
GTCAAGCCGG GCCCGGTCAG GGCACGGGCC CGCATGGAAT CGGGCGTCAG CCAGCGGGTG
CGCGACAGCC ATCCCGACTG GCAGGGCCGC GCGCAGGAGG ACGCGGCCCC GATGGCGCCG
CACCTGAACC TGTGGATCGT TGCCCGGGGC ATCAATATCG GCCTGAACAC TCGGATATAT
TTCGACGACG AGGCTCCGGC CAACGCCACC GATCCGGTGC TGAACCTGAT CGAATGGGAA
CGCCGCCGCG CCACGCTGAT CGCGAAACGC ACCATGCGCG ACGGTGTCCC GGTCTATCGC
TTCGACATTC GCCTGCAGGG CGAGGACGAG ACGGTGTTCT TCGATGTCTG A
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| Protein sequence | MKVVDARANR PQYLQETASQ TAGPYVHIGL APGAAGFRIF DRELGWDIAG PNAAGERIRV
EGVVIDGTGS PVKDVLIEVW QANAAGIYAH PEAGGEVEEG FRGWGRVITD FETGEWGFDT
VKPGPVRARA RMESGVSQRV RDSHPDWQGR AQEDAAPMAP HLNLWIVARG INIGLNTRIY
FDDEAPANAT DPVLNLIEWE RRRATLIAKR TMRDGVPVYR FDIRLQGEDE TVFFDV
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