Gene Pden_3487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3487 
Symbol 
ID4582042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp633436 
End bp634008 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content68% 
IMG OID639770800 
ProductMarR family transcriptional regulator 
Protein accessionYP_917253 
Protein GI119386198 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.544367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.213963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACTT ATCATAAGCA CACTAGTCAA TATGATAAGT ATGCTTGCCA TCATGCGCCC 
ACTTGCCTAG CCTGCGACGA ACCCAAGCGA GCCGGTGCCA TGACGACGCT TTACGACCTG
CCGGGCCACC TGATCCGGCG CCTGAACCAG ATCTCGACCG CGATCTTCGC CGCCCGGATG
GACGAGGCGG GGCTGGACCT GACGCCGGTG CAATATGCGG CCCTGGCTGC ACTGGCCGAA
CATCCGGGGG TGGATCAGGC GACGCTGGCC GGGCTGATCG CGCATGATCG CGTCACCATC
GGCGGGGTGG TGGACCGGCT GGAGGGCAAG GGGCTGCTGT CGCGCGGCAT CAGCGCGCAG
GACCGCCGCG CGCGGGTGCT GGAACTGACC GCGGCGGGGC AACAGACGCT GGCCCGGCTT
GCCCCCGCCA TCGCCGAGGT GCAGCAGCGC ACGCTGGCCG GGCTGACTCC GGCCGAGGCC
GAGGCATTCG TCGCGCTGCT GCGCAAGACG ACCGAGGCCG GCAACGAATA CAGCCGCGCG
CCCCTGCGGA CCGGAGCGCG CGGAGAGGAT TAG
 
Protein sequence
MHTYHKHTSQ YDKYACHHAP TCLACDEPKR AGAMTTLYDL PGHLIRRLNQ ISTAIFAARM 
DEAGLDLTPV QYAALAALAE HPGVDQATLA GLIAHDRVTI GGVVDRLEGK GLLSRGISAQ
DRRARVLELT AAGQQTLARL APAIAEVQQR TLAGLTPAEA EAFVALLRKT TEAGNEYSRA
PLRTGARGED