Gene Pden_3468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3468 
Symbol 
ID4582024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp612943 
End bp613653 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID639770782 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_917235 
Protein GI119386180 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA TGACGAAAAT TATGGATCTG GCCGATCTTC CCTGGTTCGC CGGGCTGCCG 
GACGAGGTGC TGGCGGGAAT CGAATCCGGC TCGCGCCGCC GCCATGCCGA CCGGGGCCAA
CTGATCATCG AGCGCGGAGA GCCGGGGGAC TCGGTGCTCT TCGTCCTGTC CGGGCACGTC
CTGGCCGTGC AATGGACGCG AAGCGGCCGC GAGATCGTCT ATAGCGAGAT CGCCCCGGGC
AGCGCCTTCG GCGAATTGTC GGTGCTGTCC GGGATGCCGC GCTCACTGTC GCTTTACGCG
CGCACGGCTT GCGTCCTGCT CGAAACGCCG GGCACCCTGC TGACCGGGCT CATGGATACC
CAGCCGCAGG TCCGGCAGGC GGTGATCCAG GACCTCGTCC GGCGGATCCA CGACCTGACC
GAACGGGTGC AGGAGCTGAC CGCGCTGGAT GTCGAGGAAC GGCTGCGTGC CTATCTGCTG
CGCGTTTCGC TGGAGCATGG CGGCCTGGAG CCGGGCCGCC GGATGCCCGA TCCGCCGACC
CATGCCGAAA TGGCGAACAT CATCGGCGCG AACCGCGAGG CGGTCAGCCG GGCGCTGGCC
AAGCTCAGCC GCGCGGGCAT CATCGAATCC GGGCGGAAAT ACCTGCGCAT CATGCAGCCC
GACGCCCTGA TCCCGGACGA TACGGGAAGG GGCGACTGCC CTTCGCGATA G
 
Protein sequence
MENMTKIMDL ADLPWFAGLP DEVLAGIESG SRRRHADRGQ LIIERGEPGD SVLFVLSGHV 
LAVQWTRSGR EIVYSEIAPG SAFGELSVLS GMPRSLSLYA RTACVLLETP GTLLTGLMDT
QPQVRQAVIQ DLVRRIHDLT ERVQELTALD VEERLRAYLL RVSLEHGGLE PGRRMPDPPT
HAEMANIIGA NREAVSRALA KLSRAGIIES GRKYLRIMQP DALIPDDTGR GDCPSR