Gene Pden_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3338 
Symbol 
ID4581896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp497835 
End bp498680 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content68% 
IMG OID639770655 
Productrhodanese domain-containing protein 
Protein accessionYP_917108 
Protein GI119386053 
COG category[P] Inorganic ion transport and metabolism
[S] Function unknown 
COG ID[COG0607] Rhodanese-related sulfurtransferase
[COG4275] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.337326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGC CTGATGCCAT AACCTGCGAC AAGCTCGCCA AGCTGATCGG CACCGCACGA 
TGCCCCGTCG TCCTCGACCT GCGCCGGGCG GATGCGAGAG ACACCGAACC CCGTCTCATC
CCCTCCGCCC GATGGCTGGC TGAGGATGAA ATCGCTCCTG CGGCGCTTTC GGAGCTGGCC
CGCAGCCTGG ATCGTCCGGT GGTGGTCCTA TGCGCCGAGG GACACGGGCG CAGCCAGGGC
GTCGCCGCCT GGCTGCGCCA TGAAGGGGTC GCAGCCGAGT ATCTGGAGGG AGGCATGGCG
GCATGGCTTG CCGCCGGCCT GCCACTCGTC ACGACCACAA GGATCACCGG CCATGATCCG
CAGGGTCGCA GCCTGTGGGT GACACGGGCG CGGCCCAAGA TCGATCGCAT CGCCTGCCCC
TGGCTGATCC GGCGCTTCAT CGATCCACGG GCGGTGTTTC TGTTCGTCGC CCCGGCCGAG
GTCCCCGCAG TGGCCGAGCG GTTCGGCGCC ATGCCCTTCG ATGTCGAAGG CGTGTTCTGG
AGCCATCGCG GCGAGGACTG CACCTTCGAC ACGCTGCTGA AGGAAACCCG GTTGAGCATC
CCGGCGCTCG ACCGGCTGGC GTTGATCGTG CGCGGGGCGG ATACCGCCCG CCTGGACCTC
GCCCCCGAAG CGGCGGGCCT GCTTGCGGCG TCCCTGGGCC TGTCGCGGAT GTATTCCGAC
GATCTGGAAC AACTCGATGC CGGATTGCAG CTCTATGACG CCTTCTACCG TTGGGCGCGC
GATGCCACGG ACGAGATCCA CAACTGGCCC ACCAACGCCA GGGGTACGGG CCGGAGCGCC
ACATGA
 
Protein sequence
MPAPDAITCD KLAKLIGTAR CPVVLDLRRA DARDTEPRLI PSARWLAEDE IAPAALSELA 
RSLDRPVVVL CAEGHGRSQG VAAWLRHEGV AAEYLEGGMA AWLAAGLPLV TTTRITGHDP
QGRSLWVTRA RPKIDRIACP WLIRRFIDPR AVFLFVAPAE VPAVAERFGA MPFDVEGVFW
SHRGEDCTFD TLLKETRLSI PALDRLALIV RGADTARLDL APEAAGLLAA SLGLSRMYSD
DLEQLDAGLQ LYDAFYRWAR DATDEIHNWP TNARGTGRSA T