| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3291 |
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| Symbol | |
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| ID | 4581852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 456599 |
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| End bp | 457591 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639770612 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_917065 |
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| Protein GI | 119386010 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.238915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.298446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGA TATCTACTGA CCCGGGCCGC CACGCGCTGA ACGGCCCGAC CATGGGTACG
CGCTGGTCGG CGCTTTTCCA TGCCGATGCC GGGCTGGACC CCGCCCCGGT GCAGGCGGCC
TTGCAGGCGG CCGTGGCGGA TGTCGACGCC CTGATGTCGA CATGGAAACC CGACAGCGAC
CTGATGCGCC TGAACCGGAC GCCCGAAGGT GTCCGGGTGA TCGTTCCCGC CAGGTTGGCC
GAGGTGCTCG ACCTCGGGCT GAGGATCGGG ACCGCATCGG GCGGCGCGTT CGACATCGGC
ATGGGCGATG CGGCGCGCGC GTGGGGTTTC GGGTCTGAGC CGGCCAATGC CGAGGCTATG
CGCGCGGCGA TGGCCACCGC GCGCCGGCCC GCGCAGGAAG CGCTGGAGGT CGACCCTCTG
GCCGGGCTGG CGCGAAAACA CGCGCCGATC GCGCTCGATC TCAACGGCAT CGCCAAGGGG
CATGGCGTCG ACAGGCTGGC CAAGACGTTG CAGGGCTTCG GCATCACCGC GTTCCTTGTC
GGCATCGACG GCGAAATGCG TGCATCCGGG CTGCGACCCG ATGGCATGCC GTGGACGGTC
GCCGTCGAGA TGCCCGATCC CGAACGCCGC GCGCCTCACT CCATCCTGAA GCTCGCAGAT
GCCGCCGTCG CCACGTCGGG CGACTACCGC CACTATGTGA CCCTTCGCGG CCGACGGCTG
TCGCACACGA TGGACCCGAC GACGGGCGGG CCGCTTCGCT CGTCGCCGGC CTCGGTCACC
GTCGTCGCCC GCACCTGTGC CGAAGCCGAC GCCTGGGCGA CCGCGCTGAT GGTGCTGGGT
CCGCAAGCCG GCGGCGAACT GGCTTCGCGT CTCGGCCTCC ATGCGCTGTT CCTCATCCGC
GAGGCAGGCG TCATCCGGAC CCATGCCGTC GGGGCGCTGT TCGACAGCCC GATGGTATCG
GCGGCAGGCC GCGAGGGTCT GGTTCGTGCC TGA
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| Protein sequence | MPKISTDPGR HALNGPTMGT RWSALFHADA GLDPAPVQAA LQAAVADVDA LMSTWKPDSD
LMRLNRTPEG VRVIVPARLA EVLDLGLRIG TASGGAFDIG MGDAARAWGF GSEPANAEAM
RAAMATARRP AQEALEVDPL AGLARKHAPI ALDLNGIAKG HGVDRLAKTL QGFGITAFLV
GIDGEMRASG LRPDGMPWTV AVEMPDPERR APHSILKLAD AAVATSGDYR HYVTLRGRRL
SHTMDPTTGG PLRSSPASVT VVARTCAEAD AWATALMVLG PQAGGELASR LGLHALFLIR
EAGVIRTHAV GALFDSPMVS AAGREGLVRA
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