Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3281 |
Symbol | |
ID | 4581842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 447565 |
End bp | 449121 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639770602 |
Product | transposase, IS204/IS1001/IS1096/IS1165 family protein |
Protein accession | YP_917055 |
Protein GI | 119386000 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0194889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCAT GGTTTTCACG CCGAGATTTT CTGCCGGCAG GGCTTACGGC CGATCAGATC GAGCTCGATG GCAATACCAT CCGTATCCAT GCCCGCTCTT CGGCGGCCGC GGCCGCCTGT CCACACTGCG GGAGCATTTC GGAGCATGTC CACAGTCGGT ATCGACGTCG CCCGGCCGAT GTTCCTGCGC ATGGGCGAGC CGTGGAAATC GTCTTGCAGG TTCGTCGCTT TCGCTGCCGC GCGCCCGGCT GTCCGGCCCG GATTTTCGCC GAACGGTTTC CGTCCGGCGT CACCCGACCG CATATGCGAC GCACCTCGCG CTTGCAGGAT CTTGTGCGTC ACCTCGGTCT TGCCCTCGGC GGACGACCTG CTCAGGCGCT CGCCCGGCGC CTTCTCGTGC CTGCAAGCAA AGACACGTTC TTGCGTGGGG CGCGGAGCCT GATGGGCCCC GTCTCCGAAC CACCGCGTGT CATCGGCATC GATGACTGGG CATGGCGCAA GGGGCAGCGT TACGGCACGA TGATCTGCGA CCTGGAACGG CGGCAGGTGA TCGACCTGCT GCCCGATCGC GAGCCTGCCA CCGTGGAAGC GTGGCTCCGC GCACATCCCG GCATCCGGAT CATCGCCCGC GACCGCAACG GCGGCTATGG CGGTGCCGCC ACCCGTGCCT TGCCACAGGC GGTTCAGGTC GCCGATCGTT GGCATCTGCT TGAGAACGCG AGTGCCGCAT TCCTGGCGGC CGTGCAGCGC AGCATGCCCG TCATCCGCAG GGCGATCGGG GCGAAGACGC TCGATCCCGC GCTGCTGACG GCAGCGGAAA GGCTGCAATA CGAAGGCTTT CGGCGTCGCC AGCAAACCAA TCGGATGGTG AGGACGATGG CCGATGAGGG CCTGCCCATC AAGCGTATCG TCCGCTCGAC CGGCCTCAGC CGCAAGCTCG TTCGCCAGAT CCTGCGTGGC GAGCGCGAAG ATGTCTTCCG CATCCGCGAA AGCAGTCTGA CACCCTGGCT GCCACGGCTG GAGCGGGAAT GGAACGGTGG TTGCCGGAAT GGCGCCGAGC TTTGGCGCCG CCTCAGGGAG GATGGTTTCC GCGGCAGTCT TCGGGTCGTC GGAGAATGGG CGACACGCCA GCGCCGCGCC GAGCAAGCTG TGCCGAACGG GATGGGGAAA TCGCCACCTG CCCGCAGGAT TGCGCGGCTC CTGACCATGG GGCGGGATCA CCTGTCCAGA GCCGATGCGC TTCAGGTCGC GCAGATCGAA GCGGCATCGC CAGCCCTTGC GACCGCCCGG GCGCTCGCCG ACAGGTTCAC GGATATGGTT CGAAACGGGC GTGAGGATGT CTTGGCCAGC TGGCTCGATG AGGCGGCAGA CAGCATGATC GCTTCCTTTG CCCGTGGCCT TCGCAGCGAC TGCGCCGCCG TTGCCGCCGC CTTGCGCGAA CCTTGGTCGA ACGGGCAGAC AGAGGGGCAG ATCAATCGGC TGAAGACCCT CAAACGCCAG ATGTATGGCC GCGCCAACAT CGATCTGCTC AGGGCACGGC TCCTCGCCCC GGCGTAA
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Protein sequence | MASWFSRRDF LPAGLTADQI ELDGNTIRIH ARSSAAAAAC PHCGSISEHV HSRYRRRPAD VPAHGRAVEI VLQVRRFRCR APGCPARIFA ERFPSGVTRP HMRRTSRLQD LVRHLGLALG GRPAQALARR LLVPASKDTF LRGARSLMGP VSEPPRVIGI DDWAWRKGQR YGTMICDLER RQVIDLLPDR EPATVEAWLR AHPGIRIIAR DRNGGYGGAA TRALPQAVQV ADRWHLLENA SAAFLAAVQR SMPVIRRAIG AKTLDPALLT AAERLQYEGF RRRQQTNRMV RTMADEGLPI KRIVRSTGLS RKLVRQILRG EREDVFRIRE SSLTPWLPRL EREWNGGCRN GAELWRRLRE DGFRGSLRVV GEWATRQRRA EQAVPNGMGK SPPARRIARL LTMGRDHLSR ADALQVAQIE AASPALATAR ALADRFTDMV RNGREDVLAS WLDEAADSMI ASFARGLRSD CAAVAAALRE PWSNGQTEGQ INRLKTLKRQ MYGRANIDLL RARLLAPA
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