Gene Pden_3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3268 
Symbol 
ID4581829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp432650 
End bp434680 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content64% 
IMG OID639770589 
Producthypothetical protein 
Protein accessionYP_917042 
Protein GI119385987 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000411591 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAATTTC TTCAAGACTC CGTGATTCTC TCCGCCGCGG GCGATGCGCT CGGCCTCATT 
CTGCAGCCAG AGCGCATCAT GTTCCTGTGG CTTGGCGTGA TCGTGGGACT GGCGATCGGG
CTGCTGCCCG GCGTGGGCGG GCTGACGGGC TTTGCGATCC TGGTGCCCTT TACCTACACG
ATGGACCCTT ATTCGGCGTT TGCCATGCTG CTTGGGATGG CGGCGGTCAC GACAACCTCG
GACACCATTC CCGCGGTGCT CTTTGGTGCC GCCGCGCAAG CGACAGTGCT TGACGGCCTG
CCCATGACCA AGCGGGGCGA AGCCGGGCGC GCGCTCAGCG CAAGCTACCT CGCCAACATG
ATGGGCGGCT TGATAGGCGC GATTATCCTG GCGGTTTCGC TGCCCGTGGT GCGCCCCTTC
GTGCTGGCCA TAGCCACCCC CGAACTGTTG GCGATGACCA TTCTGGGGAT CGCGATGGTA
GCGACGCTCT CTGGAAAATC GCCGCTGAAG GGCTTGGTCG TCGCCTGCTT CGGCATTCTG
GTCGGGATGG TCGGCACCGA TACGCAGACG GGTCAGATGC GCTGGACGGG CGGGCTGCTA
TATCTGCAAG ACGGCCTGCC GATGCTGCCG ATCCTGCTGG GCCTTTTTGC GCTGCCCGAG
CTTTGCGATC TTGCCATCCA GCGGACCTCC ATCGCCCAGG ACATGAAGTT CAGCCCGCGT
CAGGGCATGC TTCAGGGCAT CAAGGATGTC GCGCGGAACT GGTTTCTCGT CCTGCGCTGC
AGCAGCCTCG GCGCGGTCCT GGGCGCGATT CCCGGCATGA CCGGCTCGGT CGTGGACTGG
ATCGCCTATG GCCATGCGCT CCAGACCGAA AAGGGCGCGA AAGAGAGCTT TACCAAGGGG
GACGTGCGGG GCGTCATCGC GCCGGAATCG GCCAACAACG CCCGCGACGG CGGCAGTCTT
GTGCCGATGC TGGCTTTTGG CGTGCCGGGC GGTGCAGCGC AGGCGATCCT GCTCGGGGCG
CTGATGGTGC ACGGTTTCAC GCCAGGCCCT GACATGCTGA CGAAGAATCT GGATCTGACC
TATTCGATGG TGTGGTCCAT TGCGCTTGCC AACATCTTCG GGGCCGGCAC CTGCTTCCTG
CTCAGCGGTC AGTTCGCCAG GATCTCGACC CTGCGCTACA CATTGGTCCT GCCGATCATC
ATGTCCATCG TCTATGTCGG CGCCTTCCAG GGCTCGCGGA GCTGGGGTGA CATGTATGTG
CTGCTGATCT TCGGCCTGAT CGGATGGAGC ATGAAGCGGC TGAGATGGCC TCGTCCGCCC
CTGATCCTGG GGCTCGTTCT GGGCGCGTTG ATCGAGCGGT ACATGTCGAT CTCGTTCCTT
CGCTACGGTA TGGACTGGGC GCTGCGTCCG GGGGTCATGG TGCTTTTGGC TTGCGCGGCC
CTCATCATGT TCAGCCCGGT ACTGCGGCTG CTTCGCAAGG AGAACCGGGC GGGCGTCGTG
CTTCGTCGCC GTCCCTATCT GGGGCTCGAC GATCTGGCCT ATGGGCTTTT CATCGCGATC
GGCGTCTACG TGCTCGTCAC CTCGCGGGAC TGGCTCTTCA ACGCGCGGAT CGGGCCTGTG
GTCGTTGCCT CGACGATGGT CATCGCTGGC GGGCTGAGCC TGATTCACAA GACCTTCTTC
AAGGAGGTCC GGGCGGCCGC AACGAACGGC GTTCACATGG ACATCGGCGG CGACCCCGAG
GAGGAGCTGC CCAGGCGGCT GGTGCTCGTC AGGGCGGCGC GGTTCTACGG TTGGTTCGTG
CTGTTTCTGT TGTCGATGGC GGTGATCGGT CTGCTTCCGA CCGTGCCGCT GGTCATCATG
GCCTTCATGC GGATCGAGGG GCGGGAACCC TGGCGTCTCA GCGCGATCCT CGCGGCATCG
GTGACACTGC TTCTCTATAT CGTGTTCCAC CGGATCATTC ACGTGCCCTG GCCCACCAGC
CTTATGGGAG ACTGGTTCCC GATCCTGCGG GAGGTGGTTC CCTCGATGTA G
 
Protein sequence
MEFLQDSVIL SAAGDALGLI LQPERIMFLW LGVIVGLAIG LLPGVGGLTG FAILVPFTYT 
MDPYSAFAML LGMAAVTTTS DTIPAVLFGA AAQATVLDGL PMTKRGEAGR ALSASYLANM
MGGLIGAIIL AVSLPVVRPF VLAIATPELL AMTILGIAMV ATLSGKSPLK GLVVACFGIL
VGMVGTDTQT GQMRWTGGLL YLQDGLPMLP ILLGLFALPE LCDLAIQRTS IAQDMKFSPR
QGMLQGIKDV ARNWFLVLRC SSLGAVLGAI PGMTGSVVDW IAYGHALQTE KGAKESFTKG
DVRGVIAPES ANNARDGGSL VPMLAFGVPG GAAQAILLGA LMVHGFTPGP DMLTKNLDLT
YSMVWSIALA NIFGAGTCFL LSGQFARIST LRYTLVLPII MSIVYVGAFQ GSRSWGDMYV
LLIFGLIGWS MKRLRWPRPP LILGLVLGAL IERYMSISFL RYGMDWALRP GVMVLLACAA
LIMFSPVLRL LRKENRAGVV LRRRPYLGLD DLAYGLFIAI GVYVLVTSRD WLFNARIGPV
VVASTMVIAG GLSLIHKTFF KEVRAAATNG VHMDIGGDPE EELPRRLVLV RAARFYGWFV
LFLLSMAVIG LLPTVPLVIM AFMRIEGREP WRLSAILAAS VTLLLYIVFH RIIHVPWPTS
LMGDWFPILR EVVPSM