| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3262 |
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| Symbol | |
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| ID | 4581823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 425326 |
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| End bp | 426882 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639770583 |
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| Product | transposase, IS204/IS1001/IS1096/IS1165 family protein |
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| Protein accession | YP_917036 |
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| Protein GI | 119385981 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3464] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00994132 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGCAT GGTTTTCACG CCGAGATTTT CTGCCGGCAG GGCTTACGGC CGATCAGATC
GAGCTCGATG GCAATACCAT CCGTATCCAT GCCCGCTCTT CGGCGGCCGC GGCCGCCTGT
CCACACTGCG GGAGCATTTC GGAGCATGTC CACAGTCGGT ATCGACGTCG CCCGGCCGAT
GTTCCTGCGC ATGGGCGAGC CGTGGAAATC GTCTTGCAGG TTCGTCGCTT TCGCTGCCGC
GCGCCCGGCT GTCCGGCCCG GATTTTCGCC GAACGGTTTC CGTCCGGCGT CACCCGACCG
CATATGCGAC GCACCTCGCG CTTGCAGGAT CTTGTGCGTC ACCTCGGTCT TGCCCTCGGC
GGACGACCTG CTCAGGCGCT CGCCCGGCGC CTTCTCGTGC CTGCAAGCGA AGACACGTTC
TTGCGTGGGG CGCGGAGCCT GATGGGCCCC GTCTCCGAAC CACCGCGTGT CATCGGCATC
GATGACTGGG CATGGCGCAA GGGGCAGCGT TACGGCACGA TGATCTGCGA CCTGGAACGG
CGGCAGGTGA TCGACCTGCT GCCCGATCGC GAGCCTGCCA CCGTGGAAGC GTGGCTCCGC
GCACATCCCG GCATCCGGAT CATCGCCCGC GACCGCAACG GCGGCTATGG CGGTGCCGCC
ACCCGTGCCT TGCCACAGGC GGTTCAGGTC GCCGATCGTT GGCATCTGCT TGAGAACGCG
AGTGCCGCAT TCCTGGCGGC CGTGCAGCGC AGCATGCCCG TCATCCGCAG GGCGATCGGG
GCGAAGACGC TCGATCCCGC GCTGCTGACG GCAGCGGAAA GGCTGCAATA CGAAGGCTTT
CGGCGTCGCC AGCAAACCAA TCGGATGGTG AGGACGATGG CCGATGAGGG CCTGCCCATC
AAGCGTATCG TCCGCTCGAC CGGCCTCAGC CGCAAGCTCG TTCGCCAGAT CCTGCGTGGC
GAGCGCGAAG ATGTCTTCCG CATCCGCGAA AGCAGTCTGA CACCCTGGCT GCCACGGCTG
GAGCGGGAAT GGAACGGTGG TTGCCGGAAT GGCGCCGAGC TTTGGCGCCG CCTCAGGGAG
GATGGTTTCC GCGGCAGTCT TCGGGTCGTC GGAGAATGGG CGACACGCCA GCGCCGCGCC
GAGCAAGCTG TGCCGAACGG GATGGGGAAA TCGCCACCTG CCCGCAGGAT TGCGCGGCTC
CTGACCATGG GGCGGGATCA CCTGTCCAGA GCCGATGCGC TTCAGGTCGC GCAGATCGAA
GCGGCATCGC CAGCCCTTGC GACCGCCCGG GCGCTCGCCG ACAGGTTCAC GGATATGGTT
CGAAACGGGC GTGAGGATGT CTTGGCCAGC TGGCTCGATG AGGCGGCAGA CAGCATGATC
GCTTCCTTTG CCCGTGGCCT TCGCAGCGAC TGCGCCGCCG TTGCCGCCGC CTTGCGCGAA
CCTTGGTCGA ACGGGCAGAC AGAGGGGCAG ATCAATCGGC TGAAGACCCT CAAACGCCAG
ATGTATGGCC GCGCCAACAT CGATCTGCTC AGGGCACGGC TCCTCGCCCC GGCGTAA
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| Protein sequence | MTAWFSRRDF LPAGLTADQI ELDGNTIRIH ARSSAAAAAC PHCGSISEHV HSRYRRRPAD
VPAHGRAVEI VLQVRRFRCR APGCPARIFA ERFPSGVTRP HMRRTSRLQD LVRHLGLALG
GRPAQALARR LLVPASEDTF LRGARSLMGP VSEPPRVIGI DDWAWRKGQR YGTMICDLER
RQVIDLLPDR EPATVEAWLR AHPGIRIIAR DRNGGYGGAA TRALPQAVQV ADRWHLLENA
SAAFLAAVQR SMPVIRRAIG AKTLDPALLT AAERLQYEGF RRRQQTNRMV RTMADEGLPI
KRIVRSTGLS RKLVRQILRG EREDVFRIRE SSLTPWLPRL EREWNGGCRN GAELWRRLRE
DGFRGSLRVV GEWATRQRRA EQAVPNGMGK SPPARRIARL LTMGRDHLSR ADALQVAQIE
AASPALATAR ALADRFTDMV RNGREDVLAS WLDEAADSMI ASFARGLRSD CAAVAAALRE
PWSNGQTEGQ INRLKTLKRQ MYGRANIDLL RARLLAPA
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