Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3225 |
Symbol | |
ID | 4581789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 388262 |
End bp | 390559 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639770549 |
Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
Protein accession | YP_917002 |
Protein GI | 119385947 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAACCG CCATCGAAAA GGTAGCCGTA CTTGGCGCTG GCGTCATGGG CGCAGGCATT GCCGCGCATC TGGCGAATGC GGGTGTGCGG GTCGTTCTGC TGGATGTCGA CAAGGCGGCA GCCGATGCCG GCATCCGGCG CGCGCGCGAC GAGGGTGGTT TCATGGACCC GGCATTCGCG GCCCGCATCG CGACGGGATC GACCGTCAGG GACCTTTCCC TTCTCGCGGA CGCGGATTGG ATCGTCGAGG CCTTGCCCGA GCGGTTGGCG CTGAAGCAAA GCCTTTACCG GCAGCTTCAA GGCATACGCA AACCCGGCTC GATCTTGTCA TCGAACACCT CGACGATACC GCTTGCCGCG CTGGTCGGCG GCATGGCCGG GGACTTCGCG GCCGATTTCC TGATCACCCA TTTCTTCAAC CCACCGCGGC GGATGCGGCT GCTGGAACTG GTCGCGGGTC CGGCCACCCG CCCCGAGATC GTCGCCCTGA TCACGGACTT CTGCGACCGC AGGCTGGGCA AGGACGTGGT GTCCTGCCGC GACACTCCGG GATTCATCGC CAACCGGATC GGCAATTACT GGATGATCAC CGCCCAGAAC GAAGCGATCC GGCTGGGATT GGACATCGAG GACGCGGATG CGATCATCGG GCGTCCATTC GGCATTCCGG CGACGGGAAT CTTTGGCCTG ATGGATCTGG TCGGCATCGA CCTCGTCCCT ACCGTTATTC GCAGCTTGCA AGACGCACTG CCGCCCGAAG ATGCGATCAA CGCCTATGAG GCCGAACCAC CAATCGTCGG CCGGCTGATC GCCGAAGGAC GCACGGGGCG CAAGGCGGGC GCCGGCTATT TCCGGCGTTC TGCCGGGCGG GTGCAAGAGG TGATGGATCT GAAGACCGGC GACTACCGTG CGAAGCGGGA CGGCATCCCG GCATGCGTTG CAGAAACCCA CGGCGATCCG CGAAAGCTGA TGGAGCACGA TTCTACGGGT GGCGAATATG CCCTGCGCGT GATGCAGGGT ACGCTTGCCT ATGCGGCGAG CCTTGCGCCC AAGATCGCCG ACGGCCCCGA TGCGGTCGAT GACGCGATGC GCGGCGGCTA TGGCTGGAGT ATAGGGCCCT TCGAAATGAT CGACCGGCTT GGACCGGATT GGCTCGCCGG CGTTATTGCG GCAAGCGGCG AAACCTTGCC GCCCTATCTT GCCCTAGCGG CGGAACGCGG CGGCTTCCAT TCGATCCGCG ACCGCATCAG AACCGCACTT CTGCCGGATG GAGGCACGGC GCCCCGCCGT CGCACCGAAG GCGCCCTGAG CCTTGGCGAA CTGACCCAGT CGGGCAAGCC CTTTGCGGAT AACGGCTGCG CGGCGTTGTG GGATATAGGC GAAGGCGTCG CTTGCCTGGA AATCCGCACC AAGATGAACA CCCTGTCGCC GCCTCTGCTG GAGGCTATCG ACAAGGCTCT TGACGCCGTG GGCCAGAACT TCAGGGCCTT GGTCATCGGC AGTGACGCGC CTCGGTTCAG CGCCGGGGCA GACCTGTCGG CGCTGCTTCG CGCTGTCGAG GCGGGCGGAC CGGATGAACT TCTCAGGACC ATCCACGCGG GACAACGGGT CTTCGCGGCC ATCAAGCGGG CGCCCTTCCC TGTCGTCGGA GCGGCCACCG GCATCGCACT TGGCGGCGGG TGCGAGCTGC TTTTGCACTG CGACGCGATC CAAGCCCATG CGGACCTTCA GATGGGCCTT GTCGAGACGA AAGTAGGGTT GGTTCCAGGC TGGGGAGGAT GCAAGGAGCT TTTGCTGCGC ACCACCGCCG CACCTTCCGG GGGGCGTGGA CCGGCGGCGA TTGCAGCCAG CGTGTTTGAT GTGATCGCCA ATGCACGCGT GTCATCAAGC GCATTCGACG CGCGCAAGCT TGGATACCTG CGCCCTTCGG ACAACATCAC GATGAACCTC GACCGGTTGC TGGCCGATGC ACGGCAATGC GCGCTTGAAC TGGCAGACGG ATACGCCGCG CCGCAAGCGG AAACGCTTGC CTTGGCAGGC CCTTCGGGTC TGTCCGGTCT CGAGGCCCAG ATCGACAGCG GGGTTCTGAG CGGTCGGATG ACCGCCCATG ACAGGCAGAT CGGCCTCGCA CTCGTAGGTA TCCTGACCGG CGGTGCCCTC GCTGACCCGA TCCGCCCGCT GTCTGAGGAT GAGCTGCTGG CGCTGGAAGC CGAGGCATTC ATCGAACTGT TCTACACACC GCAAACCCGT GATCGCATCG ACCATATGCT TGCAACCGGA AAACCTTTGC GGAACTGA
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Protein sequence | MITAIEKVAV LGAGVMGAGI AAHLANAGVR VVLLDVDKAA ADAGIRRARD EGGFMDPAFA ARIATGSTVR DLSLLADADW IVEALPERLA LKQSLYRQLQ GIRKPGSILS SNTSTIPLAA LVGGMAGDFA ADFLITHFFN PPRRMRLLEL VAGPATRPEI VALITDFCDR RLGKDVVSCR DTPGFIANRI GNYWMITAQN EAIRLGLDIE DADAIIGRPF GIPATGIFGL MDLVGIDLVP TVIRSLQDAL PPEDAINAYE AEPPIVGRLI AEGRTGRKAG AGYFRRSAGR VQEVMDLKTG DYRAKRDGIP ACVAETHGDP RKLMEHDSTG GEYALRVMQG TLAYAASLAP KIADGPDAVD DAMRGGYGWS IGPFEMIDRL GPDWLAGVIA ASGETLPPYL ALAAERGGFH SIRDRIRTAL LPDGGTAPRR RTEGALSLGE LTQSGKPFAD NGCAALWDIG EGVACLEIRT KMNTLSPPLL EAIDKALDAV GQNFRALVIG SDAPRFSAGA DLSALLRAVE AGGPDELLRT IHAGQRVFAA IKRAPFPVVG AATGIALGGG CELLLHCDAI QAHADLQMGL VETKVGLVPG WGGCKELLLR TTAAPSGGRG PAAIAASVFD VIANARVSSS AFDARKLGYL RPSDNITMNL DRLLADARQC ALELADGYAA PQAETLALAG PSGLSGLEAQ IDSGVLSGRM TAHDRQIGLA LVGILTGGAL ADPIRPLSED ELLALEAEAF IELFYTPQTR DRIDHMLATG KPLRN
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