| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3203 |
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| Symbol | |
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| ID | 4581767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 367428 |
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| End bp | 368594 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639770527 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_916980 |
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| Protein GI | 119385925 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.71331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA GGGACACCGC CGCCGCGCCG CTGCGCCTGC GGGCAGAGCC GCCCCGTGTC
ACCCGGTTGT CGCGCAAGGT GCTGGCGGGC CTCGGTGGGA TCGCCGCACT CGGCATCGGG
GCGGCGCTGA TCTTTGCCCT GCAAACCCGC GACGTCGAGC GCGGCGGCGA GGAACTGTTC
TCCACCGAAA ACCGCGCCAC CGCCGACGGG CTGGCGGAAC TGCCGCGCGA CTATGCCGGT
CCCGTCCTCG GCCCGGCGCT GCCCGGGGAT CTCGGCAAGC CGATCCTCAA TGCGCGCAAT
CGTGGTGAGC CGGTGCCCGC GCCCGGCACG CCCACCGTCA CCGCACCCGC CATGGATGCG
GCGGAGCAGC AGCGGCTGGC GGAAGAAGAG GCGGCAAGGC TCAGCGGCGT GTTCTTTCAG
GGTGGGCCAC GGTCTGCGGG CGGGTCGGAC ATGGGCGCAG GGCCAGCCGG TCAGACCCCA
GGCGCGCTTG GCACCATGGG ACAGCCCGGC GCCGCAGCCA CGCAGGACCG GCATGCGGCG
TTCCTGGGCG GCGCCGCAGA TCGCATCACC GTTGCCCCGG ATCGTGTCGA AGCTCCTGCC
TCACCCTATC TGCTGCAGGC CGGATCGGTG ATCCCGGCGG CGCTGATCAC CGGCATCCGC
TCCGATCTGC CCGGCCAGAT CATCGCCCAG GTGACGCAGC CGGTCTACGA CAGCCCTACC
GGCTCGATCC TGCTGATCCC GCAGGGCACC CGCGTCATCG GCGAATACGA TGCCAGTGTC
ACATTCGGCC AGCGCCGGGT GCTGCTCGTC TGGAACAGGC TGATCTTTCC CGATGGCCGC
TCGCTGGTGC TGGAGCGCCT GCCGGGCGCC GATGCCAGCG GCTATGCCGG GCTCGAGGAC
GGGGTCGATT ACCATTGGGG AGAGCTGATA AAGGCGGCCG GGCTGTCGAC GCTGCTGGCG
GTCGGCACCG AACTCACCGC CGGTGACGAC GACGACCGGC TGGTCCGCGC CATCCGCGAC
GGCGCCCAGG ATACCGTCGA CCAGGCCGGC CAGCAGATCG TCCAGCGCCA GCTGCTGGTC
GCCCCCACGC TGACCATCCG GCCCGGATTC CCGGTCAGGA TTCTTGTCGG CAGAGACTTG
GTCTTCGAGA ACGCAGGAGA AAGATGA
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| Protein sequence | MSDRDTAAAP LRLRAEPPRV TRLSRKVLAG LGGIAALGIG AALIFALQTR DVERGGEELF
STENRATADG LAELPRDYAG PVLGPALPGD LGKPILNARN RGEPVPAPGT PTVTAPAMDA
AEQQRLAEEE AARLSGVFFQ GGPRSAGGSD MGAGPAGQTP GALGTMGQPG AAATQDRHAA
FLGGAADRIT VAPDRVEAPA SPYLLQAGSV IPAALITGIR SDLPGQIIAQ VTQPVYDSPT
GSILLIPQGT RVIGEYDASV TFGQRRVLLV WNRLIFPDGR SLVLERLPGA DASGYAGLED
GVDYHWGELI KAAGLSTLLA VGTELTAGDD DDRLVRAIRD GAQDTVDQAG QQIVQRQLLV
APTLTIRPGF PVRILVGRDL VFENAGER
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