Gene Pden_3192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3192 
Symbol 
ID4581756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp358045 
End bp358470 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content68% 
IMG OID639770516 
ProductPilT domain-containing protein 
Protein accessionYP_916969 
Protein GI119385914 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC TTGACACGAA TGTCGTCTCC GAACCGATGC GGGAGGCGCC GAATCCCGGC 
GTGATCGGCT GGATCGACGA CCAGGCGATC GAGACGCTGC ACCTCTCGGC CATCACCGTG
GCGGAGGTCC GTTTCGGGAT CGCAGTGCTT CCCGACGGCA AGCGCAAGGC CCGCCTGCAA
TCCCGTTTCG AAACCGAGAT CCTGCCGCTC TTCGCCGACC GCATCCTGCC CTTCGACCTC
GCGGCCTCGG AAGCCTTCGC GGCGCTGATG GCCCATGCCC GGGACAAGAG CGCGGCCATA
GGCAAGGCGG ACGGCTACAT CGCCGCCATT GCCGCCGCCC ATCGGCTGAC CGTGGCCACG
CGCGATACGG CACCGTTCCT GGCCGCCGGC GTCACGGTCA TCGACCCGTG GGACGAGGCC
GGTTAG
 
Protein sequence
MILLDTNVVS EPMREAPNPG VIGWIDDQAI ETLHLSAITV AEVRFGIAVL PDGKRKARLQ 
SRFETEILPL FADRILPFDL AASEAFAALM AHARDKSAAI GKADGYIAAI AAAHRLTVAT
RDTAPFLAAG VTVIDPWDEA G