Gene Pden_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3164 
Symbol 
ID4581728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp338133 
End bp338810 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content66% 
IMG OID639770488 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_916941 
Protein GI119385886 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0356148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.905473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA AGACCAGCAC CCCCCGTAAC CTCGTCATCA ATGCCGATTG CATCGAGGCG 
ATGCAGGCTT TCGGCAGCGG TTCGGTGGAC TTCATCCTGA CCGATCCGCC CTATGTCACC
CGCTTCCGCG ACCGGCAGGG CCGCACCGTC GCCAACGACG ACAACGCCCG CTGGCTGCGG
CCCGCCTTCG CCCAGATGCA CCGGGTCCTG AAGGACGGCG GCTTCTGCGT CAGTTTCTAC
GGCTGGAACA AGGTCGATTT GTTTGTCGAG GCGTGGAAGG CGGCCGGCTT CCGCATCGTC
GGGCATCTGG TGTTCCGCAA GCGTTACGCC TCATCCGCCC GCTTCCTGCG CTACGAGCAC
GAACAGGCCT ATCTGCTGGC CAAGGGCGAC CCGGAATCGC CCGCGCGTCC GGTGCCCGAT
GTGCTGGACT TTCCCTATAC CGGCAACAAG CTGCACCCGA CGCAGAAGCC GGTGGCGGCG
CTGCGCAGGC TGATCGGGGC GTTCACGAAG CCCGGCGATC TGGTGCTGGA CCCGTTCAGC
GGCAGCGGTT CGACCTTGGC GGCGGCGCAT CTGCTGGGCC GCGACTGGCT CGGGGTTGAG
CTGGATGTTG AGCATTACCA GACCGCCGGC AAGCGGATGG CGGCCCTGCA AGAGCGGGAC
CGGAAGGCGG CGGCATAA
 
Protein sequence
MTGKTSTPRN LVINADCIEA MQAFGSGSVD FILTDPPYVT RFRDRQGRTV ANDDNARWLR 
PAFAQMHRVL KDGGFCVSFY GWNKVDLFVE AWKAAGFRIV GHLVFRKRYA SSARFLRYEH
EQAYLLAKGD PESPARPVPD VLDFPYTGNK LHPTQKPVAA LRRLIGAFTK PGDLVLDPFS
GSGSTLAAAH LLGRDWLGVE LDVEHYQTAG KRMAALQERD RKAAA