Gene Pden_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3114 
Symbol 
ID4581678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp297507 
End bp298544 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID639770438 
Producthypothetical protein 
Protein accessionYP_916891 
Protein GI119385836 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCA ATCCGCTTTT CGTCACCTTG GCCACGATTG CCCTGATCAT ACTCAGCGCC 
TTTTTCGTGA TCATTGAATT TGCCCTGCTT GGTGCGCGCC GCCACCGGCT GGAAGAACGC
GCCCCCACCA GCCCTTCGGC CCGTGCTGCG CTACGCGGCA TGAATGATCT GACCCTGATG
CTGGCGGGCG CTCAACTTGG CATCACGATC ACCACCTTTG TCCTTGGCGC GATCACCAAG
CCTGCAGTCC ACTACGCTCT CGGGCCGCTG CTCCTCGAAT GGGGGGCGCC GGGCTGGATC
GCCGAGAGCG CCTCGTTCTT TCTGTCGCTC TTGCTGGTCA CCTTCCTCCA TCTGGTCGTG
GGCGAGATGG CACCCAAGTC CTGGGCTATC GCCAATCCCG AAAGGTCGGC GATGGCGGTC
GGCGTTCTTG CTCGCGCCTA TATCTGGCCA CTGCGTCCTG TGCTGCACTG GATCAATGTC
ATCGCCAACA GGTTGGTGCG GGCGAGCGGC GTAGAGCCGG TCGAGAGCGC AGCGGTGGGC
GGTCAGGACG CTGCCACGAT CCGGCAGCTT GTCGAGCATT CAGCCGATGT CGGCACGCTG
GAGCCGGGCT TGCGACGCCA GCTTTCCGGC TTGATCGATC TGGGCACGAT GCCGGTCGAA
AGCATCATCT CGGCGGGGCA GACCGTCACC AGGGTCAAAC CGGAGGCGAC GGTGGCGAAG
GTGCGTGACA TCGCCTCCCG GACGGCCCAC ATGCGCCTTC TGACCAATGG CGGTGGCGCG
CCGCGGGTGA TCCATGTGCG CGATTTGCTG CTCAAACCCG ATACGGCCCC GGCTGCAAGC
GTGGCACGGC CCGCCTTTAC CCTGAAGGCC GGCACACCGA TCTACGAGGC ACTGGCGAGC
ATGCGTTCCG CAAGCGTGCA GCTGGCAGTG GTGATGAACG GGGATCAGAT CACCGGTGTC
GTCACCCTTG CCGACATCCT CCGGCGCGTC CTGCCCGCGT CACCGGCACC CTCCGCGACC
ACGCGCAGCC CCGCATGA
 
Protein sequence
MMTNPLFVTL ATIALIILSA FFVIIEFALL GARRHRLEER APTSPSARAA LRGMNDLTLM 
LAGAQLGITI TTFVLGAITK PAVHYALGPL LLEWGAPGWI AESASFFLSL LLVTFLHLVV
GEMAPKSWAI ANPERSAMAV GVLARAYIWP LRPVLHWINV IANRLVRASG VEPVESAAVG
GQDAATIRQL VEHSADVGTL EPGLRRQLSG LIDLGTMPVE SIISAGQTVT RVKPEATVAK
VRDIASRTAH MRLLTNGGGA PRVIHVRDLL LKPDTAPAAS VARPAFTLKA GTPIYEALAS
MRSASVQLAV VMNGDQITGV VTLADILRRV LPASPAPSAT TRSPA