Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3097 |
Symbol | |
ID | 4581661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 283197 |
End bp | 284282 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639770421 |
Product | hydrogenase (NiFe) small subunit HydA |
Protein accession | YP_916874 |
Protein GI | 119385819 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGCAAA TCGAGACTTT CTACGATGTT ATGCGCCGGC AGGGGATCAC CCGCCGCAGT TTCATGAAAT ACTGCTCGCT GACAGCAGCG GCGCTTGGCC TTGGCCCGGC TTTCGTGCCC AAAATCGCCC ATGCGATGGA AACCAAGCCC CGCACGCCGG TGATCTGGGT GCATGGTCTG GAATGCACCT GCTGCTCGGA AAGCTTCATC CGCTCGGCCC ATCCGCTGGC CAAGGATGTC GTGCTGTCGA TGATCAGCCT TGACTATGAC GATACGCTGA TGGCCGCTGC CGGCCATGCC GCCGAGGCGG CCTTCAAGGA CACCATCCAG AAATACAAGG GCCAGTATAT CCTTGCCGTC GAGGGAAACC CGCCGTTGAA CGAAGACGGG ATGTATTGCA TCACCGGCGG CAAGCCATTT GTCGAAAAGC TGCGCCATGC GGCCAGGGAC GCCAAGGCGA TCATTTCATG GGGGGCTTGC GCGTCCTATG GCTGCGTCCA GGCGGCCGCG CCGAACCCGA CGCGGGCGAC GCCGGTCCAC AAGGTCATCC TCGACAAGCC GATCATCAAG GTGCCGGGCT GCCCGCCCAT CGCCGAGGTG ATGACCGGCG TCATCACCTA TATGCTGACC TTCGACCGCA TGCCCGAGCT TGATCGTCAG GGCCGGCCGA AGATGTTCTA CAGCCAGCGC ATCCACGACA AATGCTATCG CCGCCCGCAT TTCGACGCCG GCCAGTTTGT CGAGCATTGG GACGACGAAA ACGCCAAGAA GGGCTATTGC CTTTACAAGA TGGGCTGCAA GGGCCCGACC ACCTATAACG CCTGCTCGAC CGTGCGCTGG AACGAGGGCG TTTCGTTTCC GATCCAGTCG GGCCATGGCT GCATCGGCTG TTCCGAAGAC GGGTTCTGGG ATCAGGGTTC GTTCTATGAC CGGCTGACCA ATATCAAGGC CTTCGGGGTC GAGGCCAATG CCGACAAGCT GGGCGGCATC GCGGCGGGTG CAGTCGGTGG GGCCGTCGCG GTCCATGCCG CGATTTCGGC GCTGAAACGG GCGCAGAAGA AGACCCAGGA CAAGGTGGAG GCCTAG
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Protein sequence | MSQIETFYDV MRRQGITRRS FMKYCSLTAA ALGLGPAFVP KIAHAMETKP RTPVIWVHGL ECTCCSESFI RSAHPLAKDV VLSMISLDYD DTLMAAAGHA AEAAFKDTIQ KYKGQYILAV EGNPPLNEDG MYCITGGKPF VEKLRHAARD AKAIISWGAC ASYGCVQAAA PNPTRATPVH KVILDKPIIK VPGCPPIAEV MTGVITYMLT FDRMPELDRQ GRPKMFYSQR IHDKCYRRPH FDAGQFVEHW DDENAKKGYC LYKMGCKGPT TYNACSTVRW NEGVSFPIQS GHGCIGCSED GFWDQGSFYD RLTNIKAFGV EANADKLGGI AAGAVGGAVA VHAAISALKR AQKKTQDKVE A
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