| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3087 |
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| Symbol | |
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| ID | 4581651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 270066 |
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| End bp | 271148 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639770411 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_916864 |
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| Protein GI | 119385809 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.332328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGCGTA TATTGATGCC TGTCGTCATG TCACTGCTTC TGGCATTACT TGCGGCGCGC
AGCGACGCGC AGGATGCGCC GCCGGAAGAA TTGGTGGTCG GAGTCTATGT CAGCCCACCT
TTCGTCGAGG AACACGACGA TGGCAACTAT TCCGGCATGG CAATCGATCT CTGGGAAACT
GTTGCCGACC GGATGGATCT GGCTTTTCGC TATGCCACTT ATCCAACCTT CGGCTCACTG
GTCCGTGCCA CGGCCAGTGG CGAGGTGGAT GCGGCCGTTA CCAATCTGAC CATTACCCGT
GAACGTGCCG AGCTCATCGC ATTCACCCAG CCGTGGTATG ATGCCGGGTT AAGGATCATG
GTGCCCAGTC AGGGGGGGGG CGGGTTTCGA GGCATGCTGA ACGGGCTTCA GAATGCCGGC
CACCTCCGCG CCTACATATT TCTACTGTCA ATGATCCTGA TCGCTACTGT TGGCCTGTCA
CTTTTTGATC GGCGATTTGA TCCGGATCAT CCCAGACGAT GGCGTGAATC CATCGCGGAA
AGTTTCTATC AGGTGATGTT GATTATCACC TCGGGACGAA CTGCGCGCAA GAACCTGTTC
GGCTGGGTCG GGCGCATCTG GCAGGCTCTC TGGCTTATCG TCGGCGTCGC GGTCATCGCC
TATATTACTT CTTCGGTGAC GAGCGTCATG ACCACCGTGT CACTGACCCA AGGCATCTCC
GCGCTGTCGG ACCTGCCCGG CAACACGGTT GGTGTCCTTT CCGGCAGCGT TGCTGAGCAA
TATATGCGTG ATATGGGTAT CGCCACGCGT TCATACGTCA ATATCGATGC TTCGGTTGTC
GCACTGCGCG AGGGGCGACT GGACGCGGTG GTGGGAGACG CGCCCATCCT TGAACATTAT
GTCCTTACAC ATCAGAAGGA TAACCTGGCG GTTGTCGGCA ACTTGTTTCA TCCGGACAAA
TACGGCTTTG CCTTCCCGCA TGAAAGCAAC CTGACGACAC CGACTACACT GGAGCTTCTG
GACCTTCAGG AAGACGGTAC GTTAGGGAAC CTGAGGTTGG AGTACTTCGG CAGCAGAAAT
TGA
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| Protein sequence | MTRILMPVVM SLLLALLAAR SDAQDAPPEE LVVGVYVSPP FVEEHDDGNY SGMAIDLWET
VADRMDLAFR YATYPTFGSL VRATASGEVD AAVTNLTITR ERAELIAFTQ PWYDAGLRIM
VPSQGGGGFR GMLNGLQNAG HLRAYIFLLS MILIATVGLS LFDRRFDPDH PRRWRESIAE
SFYQVMLIIT SGRTARKNLF GWVGRIWQAL WLIVGVAVIA YITSSVTSVM TTVSLTQGIS
ALSDLPGNTV GVLSGSVAEQ YMRDMGIATR SYVNIDASVV ALREGRLDAV VGDAPILEHY
VLTHQKDNLA VVGNLFHPDK YGFAFPHESN LTTPTTLELL DLQEDGTLGN LRLEYFGSRN
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