| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3038 |
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| Symbol | |
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| ID | 4581604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 214845 |
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| End bp | 216509 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639770364 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_916817 |
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| Protein GI | 119385762 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGA TAAGCCCATC CGAACCGTTG ATCGCCGACG CCGGCATCGA GGCCCTGCCG
CCGCCCGAGG GCCCGACCCA GATCATCGCG ACCGATTACG AGATCGGACA GGACAATATC
GAAGGCGTCA AGCCGGTCGC CTTCGACATC CACAACCCCG TCTTCATGAT CTCCGGCGTC
GCGGTGGTGG TCTTTACCGC GGCCACGCTG CTGTTCCCCT CGGTGCTGGG GCCGTTCTTC
GGCGGATTGC GCGACGTCGT TACCAGCAAT TTCGACTGGT TCTTCCTGAT CGCCGGCAAT
GTCTTCGTGC TGCTGTGCGT TGGCCTGATC CTGTCGCCGC TGGGCTCGGT CCGGCTGGGC
GGCCCCGAGG CCACGCCCGA TTTCTCGCTG ACCGGCTGGT TTTCGATGCT GTTTGCCGCC
GGCATGGGCA TCGGCCTGAT GTTCTATGGC GTCAGTGAGC CGCTGGGCCA TTTCACCGCC
GCATTGGGCG GGCCGGTGGT CGAAAACGGC GTGCGCACCG ATTGGGCGCC GCTGGACGGC
GCGCCGGGGG ACGAACTGGG CGCGCGGCGG CTGGCGATGG CCGCGACGAT CTTTCACTGG
GGCCTGCATC CTTGGGCGAT CTATGCGGTC GTGGCGCTGG CTCTGGCGCT GTTTGCCTAT
AACAAGGGGC TGCCGCTGAC GCTGCGCTCG GTGTTCTATC CGATTCTGGG CGAACGGGTC
TGGGGCTGGC CGGGCCATGT CGTGGATGTG CTGGCGGTGA TGGCGACGCT GTTCGGGCTG
GCCACCTCGC TGGGGATCGG CGCCGAGCAG GCATCGGCGG GTTTCCATTT CCTGTTCGGC
TGGAGCACCG CGCTGACCGC CAAGATCGTG CTGATCGTCA TCATCACCGG GGTGGCCACG
GCCTCGGTCG TGCTGGGCGT CGAAAAGGGC GTCAAGCGCC TGTCCGAGAT CAACATGATC
CTTGCGGTCC TGCTGCTGCT TTTCGTGATC CTGACCGGGC CGACCTGGCA GATCCTGACC
GGCTTTTTCG GCAATCTGGC CGCCTATGGC GCCAAGATCC TGCCGCTGTC CAACCCGTTC
GGGCGCACCG ACGACAACTT CCGCCATGGC TGGACCGCCT TCTATTGGGC TTGGTGGATC
AGCTGGTCGC CCTTTGTCGG CATGTTCATC GCCAGGGTCT CGCGCGGGCG GACCGTGCGG
CAGTTCCTGA CCGCGGTGCT GATCGTGCCC TCGCTGATCT CGGTCCTGTG GATGACGGCC
TTTGGCGGCA CCGCGATTTC CGAGACATTG GCCGGCTTTT CGGGTGTGAC CGATGCGGCG
CTGGAACTGC AGCTGTTCCA GATGCTGTCG CAGCTGCCGC TGACCGCGAT TTCCAGCTTC
ATCGGCATTG TTCTGGTGAT CGTGTTCTTC GTCACCTCCT CGGATTCCGG CTCGCTGGTG
ATCGACACCA TCGCGGCGGG CGGCAAGATC CACGCGCCGG TGCCGCAGCG CATCTTCTGG
TGCAGTTTCG AAGGGCTGGT CGCCATCGCC CTGCTTCTGG GTGGCGGGCT GACGGCCTTG
CAGGCGATGG CGGTTTCGAC CGGCCTGCCC TTCACGCTGG TGCTGCTGGG CGCCTGCTGG
GCCATTCTCA AGGGCCTGCT GGCCGAAAAG CGGGAACTGA CCTGA
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| Protein sequence | MSQISPSEPL IADAGIEALP PPEGPTQIIA TDYEIGQDNI EGVKPVAFDI HNPVFMISGV
AVVVFTAATL LFPSVLGPFF GGLRDVVTSN FDWFFLIAGN VFVLLCVGLI LSPLGSVRLG
GPEATPDFSL TGWFSMLFAA GMGIGLMFYG VSEPLGHFTA ALGGPVVENG VRTDWAPLDG
APGDELGARR LAMAATIFHW GLHPWAIYAV VALALALFAY NKGLPLTLRS VFYPILGERV
WGWPGHVVDV LAVMATLFGL ATSLGIGAEQ ASAGFHFLFG WSTALTAKIV LIVIITGVAT
ASVVLGVEKG VKRLSEINMI LAVLLLLFVI LTGPTWQILT GFFGNLAAYG AKILPLSNPF
GRTDDNFRHG WTAFYWAWWI SWSPFVGMFI ARVSRGRTVR QFLTAVLIVP SLISVLWMTA
FGGTAISETL AGFSGVTDAA LELQLFQMLS QLPLTAISSF IGIVLVIVFF VTSSDSGSLV
IDTIAAGGKI HAPVPQRIFW CSFEGLVAIA LLLGGGLTAL QAMAVSTGLP FTLVLLGACW
AILKGLLAEK RELT
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