| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3029 |
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| Symbol | |
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| ID | 4581595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 204776 |
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| End bp | 206932 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639770355 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_916808 |
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| Protein GI | 119385753 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGCG CAGTTTCGAA TGGTGGGATA GCGATTTCTT TTTTCTGCCT GGCCACAGCA
GGTCATGCGC AGACGCTGCC CAGACAGGAC GCCATCGTTC TTGACCAGGT CGTCATCCAG
GGGGGCGACG ACAGCGGCAA GAGCGGGGTG CGCGCGAAAA CCGCGACGAT TGGTCCGCTT
GGCCGGCGCG AGATCAAGGA CACGCCCTAT TCGGTCAGCG TCATCGACAA GACGCTGATT
GAAAACCAGC AGGCGACAAC CTTGCCCGAT CTGTTGAAAT ACATGCCCTC GACGCAGATG
GAGGCGCGCG GCGGCGGCGA TGTCGGGCGT CCGCAATCGC GCGGCATGCA GGGCACGCCG
GTTTTCAACA ATCGCCTCGA TGGTATGAAC ATCGTCGCCA CCACTGCGCA GCCCATCGAG
ATGTATGAAA GGGTCGAGGT CGTCCACGGC CTCGCCGGCG CCTATTTCGG CCCGGCAAGC
CCCGGCGGAC TTTTCAACTT CACCCGCAAA CGGCCCACGC AAGATCCCTA TAATCGCATC
AACACCGGCT TTACCGGCAA GGGGACCTGG CTGGCGCATG GCGATTTCGG CGGCCATGCG
GCAGACGGCA TGCTCGGCTA TCGCATCAAC GTGCTGAGCG AAGAGGGAGA CGGCTATGTG
AAGGGCAGCG ATCTGGATCG CTCGCTGATC AGCGGCGCCT TCGACATCAA CCTGACCGAC
CAGACGACAA TAGAACTGAA CGCCAGCCGC TACCGTTTCG ACAAGTTCGG CTTTCCCGGC
AGCTTCAGCT ACGACAACAG CGTGACCCTG CCCGATGCGC CGGATCCGAC CAAGGTCGGC
TACGGTCAGA AATTCGCCGG CTACGGGCTG GAGGACACGC TGGTCGGCGG CCTCGTCAAG
CATCGGTTCA ACGAGGATTG GTCCTTGACC GCCGGGATGC AGCATCAAAG GGTCAGCCGC
TGGTTCGTAT CTGTCTCGAA CGCGCTTCTG GACGACGACG GCAATTATAG CAACAGCATC
GATGGCGGGG TCAGCGGCCA GTTCCGGGTC ACCAGCAATA TCGCCGTGCT CAACGGCACG
CTGTTCACCG GCGGGGTCAA ACACGACGTC CATCTGGGCA CGACCGGCGT GAACTGGGAA
AACTACAGCC CCCGCAGTGG CAATCCGAGC GTGCAAGGCT ATCTTGGCGA TGCCAGCATC
GACAATCCGG TCCAATGGGA CGCCCCGACG GGTCTGGTGC GCAACGGGCC GCGCTACAGA
TCCTTCAGCA ACAGATCGCA AAGCCTGGTG TTGGGTGACA GCATCACCTT CAACGGGCAG
TGGTCGGCCA TCCTGTCGGG CAGCTACACT TGGTTCGACG TCAAGAACTA TGACGAAACC
GGCACGGTCA CGCAGAAATA CAGCGAGCGG GGTTTAAGCC CCAGCGTGGC GCTGAGCTAC
AAGCCCGCCG AAAACATCAC CACCTATGTC GCCTATGTCG ACACGCTGCA AAGCGGCGGT
ACCGCGCCGA CCACGGCCGC GAACGCCGGA CAGGTGCTCG CGCCCGAGCG CAGCAAGCAG
GTCGAGGCTG GGGTCAAGGC CGACCTAGGC GGCCTGGATG CTTCGGTGGC GGTGTTCCGT
ATCGAGCGAC CCTTTGCTTT CACCGGCGAG GACAATGTCT ATCGCATCCA GGGCGACCAG
GTGAACAAGG GGATCGAACT GGAACTGCGC GGCCAACTGC TGGAAAACCT CAATATCCAT
GGCGGCGTCA CCCTGCTTGA TCCCAAGCTG AGGAATACCG GCAACCCGCT GACCAGCGAT
ACCGATGTGG TGGGCGCGCC CAAGGTGCAG GCCAACCTGT TCATGGAATA TTTCTTCAAG
AGCCTGCCCG AGCTTTCGGC CAGCGCCAAT CTGCACTTCA CAGGCAAGCG TGCGGGCAAC
AACATCAACA GCTTCAAGGT CGACAGCTAT GCCACCCTGG ATCTTGGGCT GCGCTACGAA
CGCCAGATGA CCAAGGATAC CACCGCGGTC TTCAACCTCG CGATCAACAA CGTCTTCGAT
GAGCATTACT GGGCATCGAT CTTTCCCGGC AGCATCGATG GCGCGACGCG GGGCGCGAAC
AGCGCCTTTC TGGGTGCGCC CCGCGAGGTC AGGCTCTCGG CCAGCTTCAA GTTCTGA
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| Protein sequence | MRRAVSNGGI AISFFCLATA GHAQTLPRQD AIVLDQVVIQ GGDDSGKSGV RAKTATIGPL
GRREIKDTPY SVSVIDKTLI ENQQATTLPD LLKYMPSTQM EARGGGDVGR PQSRGMQGTP
VFNNRLDGMN IVATTAQPIE MYERVEVVHG LAGAYFGPAS PGGLFNFTRK RPTQDPYNRI
NTGFTGKGTW LAHGDFGGHA ADGMLGYRIN VLSEEGDGYV KGSDLDRSLI SGAFDINLTD
QTTIELNASR YRFDKFGFPG SFSYDNSVTL PDAPDPTKVG YGQKFAGYGL EDTLVGGLVK
HRFNEDWSLT AGMQHQRVSR WFVSVSNALL DDDGNYSNSI DGGVSGQFRV TSNIAVLNGT
LFTGGVKHDV HLGTTGVNWE NYSPRSGNPS VQGYLGDASI DNPVQWDAPT GLVRNGPRYR
SFSNRSQSLV LGDSITFNGQ WSAILSGSYT WFDVKNYDET GTVTQKYSER GLSPSVALSY
KPAENITTYV AYVDTLQSGG TAPTTAANAG QVLAPERSKQ VEAGVKADLG GLDASVAVFR
IERPFAFTGE DNVYRIQGDQ VNKGIELELR GQLLENLNIH GGVTLLDPKL RNTGNPLTSD
TDVVGAPKVQ ANLFMEYFFK SLPELSASAN LHFTGKRAGN NINSFKVDSY ATLDLGLRYE
RQMTKDTTAV FNLAINNVFD EHYWASIFPG SIDGATRGAN SAFLGAPREV RLSASFKF
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