Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2993 |
Symbol | |
ID | 4581559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 166833 |
End bp | 168731 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639770319 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_916772 |
Protein GI | 119385717 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.391865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.445791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGGA ACACCCCGAA GGCAAGGGGC GCGTCGAGCC TTGCGATGGC CGTGGCCATG GGCCTTGCCG TCCTGACGAC CGCGCCGGCG ACCGCCAATG ACCAGTTGGT CGAACTGGCC AAGGACCCCG CGAACTGGGT CATGACCGGG CGCGACTACA ACGCGCAGAA CTATTCCGAG ATGACCGACA TCAACAAGGA GAACGTCAAG CAGCTGCGGC CCGCCTGGTC GTTCTCGACC GGGGTGCTGC ATGGGCACGA AGGTACGCCG CTGGTCGTCG GCGACCGGAT GTTCATTCAC ACGCCCTTCC CGAACACCAC CTTCGCGCTG GACCTGAACG AGCCGGGCAA GATCCTGTGG CAGAACAAGC CCAAGCAGAA CCCCACGGCC CGGACTGTGG CCTGCTGCGA CGTGGTCAAC CGCGGCCTGG CCTATTGGCC GGGCGACGAT CAGGTCAAGC CGCTGATCTT CCGCACCCAG CTCGACGGCC ATATCGTCGC CATGGATGCC GAGACCGGCG AGACGCGCTG GATCATGGAG AACTCGGACA TCAAGGTCGG CTCGACCCTG ACCATCGCGC CCTATGTCAT CAAGGACCTG GTGCTGGTCG GCTCCTCGGG CGCCGAGCTG GGCGTGCGCG GCTATGTCAC CGCCTATGAC GTGAAATCGG GCGAGATGCG CTGGCGCGCC TTTGCCACCG GCCCAGACGA GGAATTGCTG CTGGCCGAGG ACTTCAACGC CCCGAACCCG CATTACGGCC AGAAGAACCT GGGCCTGGAG ACCTGGGAGG GCGACGCCTG GAAGATCGGC GGCGGCACCA ACTGGGGCTG GTATGCCTAT GACCCCGAGG TGGACCTGTT CTACTACGGC TCGGGCAACC CCGCGCCCTG GAACGAGACC ATGCGTCCGG GCGACAACAA GTGGACCATG GCGATCTGGG GCCGCGAGGC CACCACCGGC GAGGCGAAAT TCGCCTATCA GAAGACGCCG CATGACGAAT GGGACTATGC CGGCGTCAAC GTGATGATGC TGTCGGAACA GGAGGACAAG CAGGGCCAGA TGCGCAAGCT TCTGACCCAC CCGGACCGCA ACGGCATCGT CTACACGCTG GACCGCACCA ATGGCGACCT GATCTCGGCC GACAAGATGG ACGACACGGT CAACTGGGTG AAGGAGGTGC AGCTGGATAC CGGCCTGCCG GTGCGCGACC CGGAATTCGG CACGCGCATG GACCACAAGG CCCGCGACAT CTGTCCCTCG GCGATGGGCT ATCACAACCA GGGCCATGAC AGCTACGACC CCGAGCGCAA GGTGTTCATG CTGGGCATCA ACCACATCTG CATGGATTGG GAGCCCTTCA TGCTGCCCTA TCGCGCCGGC CAGTTCTTCG TCGGCGCCAC GCTGACCATG TATCCGGGCC CCAAGGGCGA CCGCCAGAAC GCGCTGGGGC TGGGCCAGAT CAAGGCCTAC GACGCCATCT CGGGCGAGAT GAAATGGGAA AAGATGGAGC GCTTCTCGGT CTGGGGCGGC ACCATGGCCA CCGCGGGCGG GCTGACCTTT TACGGCACGC TGGACGGCTT CATCAAGGCC CGCGACAGCG ACACCGGCGA CCTGCTGTGG AAGTTCAAGC TGCCCTCGGG CGTGATCGGC CATCCGATGA CCTACAAGCA TGACGGCCGG CAATATGTCG CGATCATGTA TGGAGTCGGC GGCTGGCCGG GCGTGGGTCT GGTCTTCGAC CTGGCCGACC CGACCGCCGG TCTGGGCTCG GTGGGCGCGT TCAAGCGGCT GCAGGAGTTC ACCCAGATGG GCGGCGGCGT GATGGTCTTC TCGCTTGACG GCGAGAGCCC CTATTCCGAC CCGAACGTGG GCGAATACGC GCCGGGTGAG CCCACCTGA
|
Protein sequence | MNRNTPKARG ASSLAMAVAM GLAVLTTAPA TANDQLVELA KDPANWVMTG RDYNAQNYSE MTDINKENVK QLRPAWSFST GVLHGHEGTP LVVGDRMFIH TPFPNTTFAL DLNEPGKILW QNKPKQNPTA RTVACCDVVN RGLAYWPGDD QVKPLIFRTQ LDGHIVAMDA ETGETRWIME NSDIKVGSTL TIAPYVIKDL VLVGSSGAEL GVRGYVTAYD VKSGEMRWRA FATGPDEELL LAEDFNAPNP HYGQKNLGLE TWEGDAWKIG GGTNWGWYAY DPEVDLFYYG SGNPAPWNET MRPGDNKWTM AIWGREATTG EAKFAYQKTP HDEWDYAGVN VMMLSEQEDK QGQMRKLLTH PDRNGIVYTL DRTNGDLISA DKMDDTVNWV KEVQLDTGLP VRDPEFGTRM DHKARDICPS AMGYHNQGHD SYDPERKVFM LGINHICMDW EPFMLPYRAG QFFVGATLTM YPGPKGDRQN ALGLGQIKAY DAISGEMKWE KMERFSVWGG TMATAGGLTF YGTLDGFIKA RDSDTGDLLW KFKLPSGVIG HPMTYKHDGR QYVAIMYGVG GWPGVGLVFD LADPTAGLGS VGAFKRLQEF TQMGGGVMVF SLDGESPYSD PNVGEYAPGE PT
|
| |