Gene Pden_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2946 
Symbol 
ID4581513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp114101 
End bp115021 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content73% 
IMG OID639770273 
Productribokinase-like domain-containing protein 
Protein accessionYP_916726 
Protein GI119385671 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.014237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTTT GCGCCGGGGA ATCGCTGATC GACATGGTGC CCGAAGGCGC CAATTACCGG 
CCCCTGCCCG GGGGCGCGGT CTACAACACC GCCATCGCGC TTGGCCGCAT GGGCGCGCAG
GCGGGCTATC TCTGGCCGAT CTCGCGCGAC GGTTTCGGCG ACATGCTGCT GCGCCCGCTG
GCCGAGGCGG GGGTGGATAC CGGCCTCTGC CCGCGCAGCG ACCGGCTGAC CACGCTGGCC
TTCGTCACCC TGACCGGGGG CGAGGCGCGC TATTCCTTCT ATGACGAGGG TTCGGCCGGG
CGCATGTTCG CCCCCGGCGC CCTGCCCGAC ATTCCCGACG ATGTCTCGGC GCTCTTCATC
GGCGGCATCA GCCTGGTGCC CGATCCCTGC GGCAGCGCCG TCGAGGTGCT GGTGGAACGC
GTCCGCCACC GCATGCCGGT GATGCTGGAC CCCAACATCC GCCCCTTCTT CATCGCCGAC
GAGGCCGCCT ATCGCGCCCG GCTCGACCGG CTCATCGGCA TGGCCGATCT GGTCAAGCTC
TCGGGGGACG ACCTGGAATG GCTGATGCCG GGCGCCAGCT TCGAGGAAGC CGCCGCCGCC
ATCCTCGACC GCGGGCCGCG GGTGGTGTTC CAGACCGGCG GCTCGGCCGG CGCGCGGGCG
CATTGGTCGG GCGCACCGCT TGCCGCGCAG GCGGTGCGGG TCGAGGTCGC CGACACGATC
GGCGCCGGCG ACACCTTCAA CGCCGGAGTG CTGGCCGCGC TCGACCGCGC CGGCGTGCTG
ACGCGCGAGG GGATCCAGCG CCTGACCCCG GAAGCCATCG CCGCAGCACT TGCGCTCGGC
ACCCGGGCGG CGGCGATCAC CGTCTCGCGC CCCGGCGCCA ACCCGCCCTG GGCGCACGAA
CTGGCCGCGC TGCCGTCCTG A
 
Protein sequence
MILCAGESLI DMVPEGANYR PLPGGAVYNT AIALGRMGAQ AGYLWPISRD GFGDMLLRPL 
AEAGVDTGLC PRSDRLTTLA FVTLTGGEAR YSFYDEGSAG RMFAPGALPD IPDDVSALFI
GGISLVPDPC GSAVEVLVER VRHRMPVMLD PNIRPFFIAD EAAYRARLDR LIGMADLVKL
SGDDLEWLMP GASFEEAAAA ILDRGPRVVF QTGGSAGARA HWSGAPLAAQ AVRVEVADTI
GAGDTFNAGV LAALDRAGVL TREGIQRLTP EAIAAALALG TRAAAITVSR PGANPPWAHE
LAALPS