Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2938 |
Symbol | |
ID | 4581505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 102392 |
End bp | 103726 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639770265 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_916718 |
Protein GI | 119385663 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAAC CATGGTCGCG CGGGGATGCG AACCGCGCTA GAAGCATCGC CAGGCGGGCC GCCCCGGACA AGGGCCGCGC CCGCGCCGAT CCCCTGTCGC CCGGCCGCCG CCGGCCGAAC GTCACGGAGC ACCCGATGCG CAAGCCCGTC CTCCTTGTCC TGATCGCCGC GGCGCTTGTC ACCCTGTGGG CCGGGCTGGC CGGGATCACC CAGGGCAAAC CCGCGACGCC CGGCTATATC AGCGCCGAGG TCTCGCGCGG TTCTCTTGAG GTATCGGTTC TTGCTGAGGG TCGTTTGAAG CCTTCGAACC TTGTTGCGGT GGGTGCGCAG GTTTCGGGTC GGATCACCGA GCTGGCGGTG GTTCTGGGCC AGCGGGTGGA GCAGGGCGAC CTGATCGCGC GGATCGACTC GGTCCAGCAG GCCAACGAAT TGCGCACCGC ACAGGCGGCG CTGGCCAATC TCAAGGCGCA GATGGCCGAG CGCCGCGCCG TGCTGGCCCT GGCCGAAAAG ACCCTGGAAC GCCAGCAGAA CCTGATCCGC TCGAACGCCG CCTCGCGCAG CACCATGGAC AGCGCCCAGC AGGATGTCGA CGTCGCCCGC GCCCAGATCG CCGCGCTGCA GGCCCAGATC GCCCAGGCCG AGGTCGCCAT CGAGATCGCC CGCACCGACC TCGACTATAC CCGCATCACC GCCCCCATGG CCGGCACCGT GCTGGCCATC GTCAGCCAGG CCGGGCAGAC GGTGAACGCG GTGCAGTCCT CGCCCACCAT CGTCGTGCTG GGCCAGCTCG ACCGCATGGA CGTGCATGCC GAGATCTCCG AGGCCGATAT CGGCAAGGTC CGGCCCGGCC AGAAGGTGCG CTTCAGCCTG CTCGACGACA GCGGCCGCAG CTACGAGGGC GTGCTGGACA GCATCGCGCC GGCGCCGCAG AGCATCGTCA ACGACAGCGC CATCCAGGGC GGCACCGGCA CCGACAGCAG CAGCGGCGCG ATCTACTACA CCGGCATCGT CCCGGTCGAG AACCCCGACG GCCGGCTGCG CAGCTACATG ACCGCCCAGG TCAGCATCGT GCTGGGCGCG GCGCAGGACG TGCTGACCAT CCCGTCCAGC GCGCTCGGCC GGCGCAATCC CGACGGCAGC CACCAGGTCC GGGTGCTGGG CGGCGCCGGC ATCGAGACCC GCGACGTGGT GATCGGGCTC AACGACAAGG TGGCGGCCGA GGTGGTCTCG GGCCTGGCCG AGGGCGAGCG CGTGGTGACC GGCGAGCAGG GCGCCGCCCC GGCCGCCGCC GCCCCCCGCG GCAGCCGCCG CATGATGGGG CCGCTGGGTG GCTGA
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Protein sequence | MRKPWSRGDA NRARSIARRA APDKGRARAD PLSPGRRRPN VTEHPMRKPV LLVLIAAALV TLWAGLAGIT QGKPATPGYI SAEVSRGSLE VSVLAEGRLK PSNLVAVGAQ VSGRITELAV VLGQRVEQGD LIARIDSVQQ ANELRTAQAA LANLKAQMAE RRAVLALAEK TLERQQNLIR SNAASRSTMD SAQQDVDVAR AQIAALQAQI AQAEVAIEIA RTDLDYTRIT APMAGTVLAI VSQAGQTVNA VQSSPTIVVL GQLDRMDVHA EISEADIGKV RPGQKVRFSL LDDSGRSYEG VLDSIAPAPQ SIVNDSAIQG GTGTDSSSGA IYYTGIVPVE NPDGRLRSYM TAQVSIVLGA AQDVLTIPSS ALGRRNPDGS HQVRVLGGAG IETRDVVIGL NDKVAAEVVS GLAEGERVVT GEQGAAPAAA APRGSRRMMG PLGG
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